Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06897 ATGAACTTTTCAACTCCAACTCATGCCACGTCATCGCCTTCTACTTCTTCCTCCTCCTATACACTCAACCAGGCTTCTCCTAATTTCAACCGTCCTTCGCTGTCGCCACAGGCAATCTGTACCTTTCCGAAAAAGTCCTTCTGCTCTGGAGCTCATGTGGGGGCTTCTGTTAACTCTAATCCTGTGAAAAATTACATAGCAGCCAGTTTTTCTTCACTGCGATCTGAAGCAAAACCCTTGGTTTCCAACCAATCACTCAAAAAGCACATGTTTTCAGTAGGAGCTTTAGTAGCTCAAACAGATCAGGATGTTTCTGATGCAACTCTTACATCTGATGATAAGATTGGAGTGTTATTGCTAAACCTTGGAGGTCCAGAGACTCTAGAAGACGTGCAACCTTTTTTATTTAATCTTTTTGCAGACCCGGATATTATACGATTGCCAAGAATATTTAGTTTTCTTCAAAAGCCATTGGCCCAGTTTGTATCTGTTCTAAGGGCCCCAAAGAGTAGAGAAGGCTACGCTTCAATTGGTGGTGGTTCTCCTCTTAGACGTATAACTGATGCACAGGCTGAAGACTTGAAGAAATCTCTTCTGGAAAAGAATGTCCCCGCTGAAGTGTATGTTGGCATGCGTTACTGGCATCCATTCACTGAGGAAGCTATCGAACAGATTAAAAAGGATGGAGTTACAAAGCTGGTTGTTCTCCCACTTTATCCACAATTTTCAATATCAACCAGTGGCTCGAGCTTACGTCTACTGGAGAGTATATTCCGAGAGGATGAGTATCTAGTCAACATGCAGCACACAGTATTGCCTTCATGGTATCAACGCGCAGGATACATAAAGGCCATGTCAAATTTAATTGAAAAAGAGCTCAAGAGTTTTGACTGCCCTAAAGAGGTCATGATATTTTTTAGTGCACATGGGGTGCCTCTTGCTTATGTGGAAGAGGCCGGTGATCCGTACAAGGCAGAGATGGAGGAATGTGTGGATTTGATCATGGAAGAGCTTGAGACAAGAAAGATAAGAAATCCCTTCACCCTTGCCTATCAGAGTAGAGTTGGACCTGTGGAATGGTTAAAACCATATACAGATGAGACCATAGTTGAACTTGGAAAAAAAGGAGTGAAAAGTATGTTGGCTGTTCCAATTAGCTTTGTCAGTGAACATATTGAAACTCTAGAAGAAATTGATGTTGAATACAAAGAATTGGCTCTAGAATCTGGTATAGAAAATTGGGGCCGTGTTCCTGCTCTAGGGTGTGAACCCTCCTTCATTTCTGATTTGGCAGATGCTGTCATTGAAAGTCTCCCATATGCTGGTGCCATGGCAGTTTCAAGCCTCGAAGCTCGACAGTCTTTGGTTCCGCTCGGAAGTGTACAAGAGTTATTGGCAGCATATGACTCGCAAAATAGGGAGTTGCCATCGCCGGTGATAGTGTGGGAATGGGGTTTGACGAAAAGTGCTGAAACTTGGAATGGAAGAGCAGCTATGTTAGCTGTGCTGCTTCTTTTGTTTTTTGAAGTCACGACACCTGATAGTGTTTTTCACCAATGGGGAATATTATCTCCCTCTCTTAGGTGA 1587 0.4304 MNFSTPTHATSSPSTSSSSYTLNQASPNFNRPSLSPQAICTFPKKSFCSGAHVGASVNSNPVKNYIAASFSSLRSEAKPLVSNQSLKKHMFSVGALVAQTDQDVSDATLTSDDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRIFSFLQKPLAQFVSVLRAPKSREGYASIGGGSPLRRITDAQAEDLKKSLLEKNVPAEVYVGMRYWHPFTEEAIEQIKKDGVTKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVLPSWYQRAGYIKAMSNLIEKELKSFDCPKEVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELETRKIRNPFTLAYQSRVGPVEWLKPYTDETIVELGKKGVKSMLAVPISFVSEHIETLEEIDVEYKELALESGIENWGRVPALGCEPSFISDLADAVIESLPYAGAMAVSSLEARQSLVPLGSVQELLAAYDSQNRELPSPVIVWEWGLTKSAETWNGRAAMLAVLLLLFFEVTTPDSVFHQWGILSPSLR 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06897 528 SUPERFAMILY Chlorophyll a-b binding protein 482 522 - -
Mepo3g06897 528 Gene3D - 276 419 - -
Mepo3g06897 528 CDD Ferrochelatase_N 115 277 IPR033659 -
Mepo3g06897 528 CDD Ferrochelatase_C 283 421 IPR033644 -
Mepo3g06897 528 ProSitePatterns Ferrochelatase signature. 304 325 IPR019772 GO:0004325|GO:0006783
Mepo3g06897 528 NCBIfam ferrochelatase 111 438 IPR001015 GO:0004325|GO:0006783
Mepo3g06897 528 MobiDBLite consensus disorder prediction 1 24 - -
Mepo3g06897 528 SUPERFAMILY Chelatase 113 443 - -
Mepo3g06897 528 PANTHER FERROCHELATASE 110 464 IPR001015 GO:0004325|GO:0006783
Mepo3g06897 528 FunFam Ferrochelatase 114 292 - -
Mepo3g06897 528 Pfam Ferrochelatase 114 437 IPR001015 GO:0004325|GO:0006783
Mepo3g06897 528 Hamap Coproporphyrin III ferrochelatase [cpfC]. 113 438 IPR001015 GO:0004325|GO:0006783
Mepo3g06897 528 Gene3D - 114 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06897 Mepo-Chr3 82670749 82676023 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06897 K01772 - gmx:100785669 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06897 3 82670749 82676023 Mepo3g06897 3 82670749 82676023 ECH
Mepo2g04492 2 53386019 53391130 Mepo3g06897 3 82670749 82676023 PCT