Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06833 ATGGTAAAGCTGAGAATCAAGATGAAGATGAAATCCCATTCTTCATTTTTCTTCATGTTCCTTGTTGTAGCCTTTAGCAGCATACAAATAAGCTTAGCAGACTGTGGTAATCTACAGGACACATGCCCCACATCATCAAAAAAGCAGACAACATTCATCAATGGTTTCTCTTGCAATAACCCATCTAACACATTAGCTCATGATTTCAAGACCATGGAATTAAGCAAAGCGGGTTCAAGAGATGATTCTGGTTCATCAATCAACATCGTCACAGCTTCTAAGTTCCCTGGCCTCAACACTCTTGGTATCTCAATTGGTAGAACAGACATCGAAGTTGATGGGATTGTGAACCTCCATAATCATCCAAGAGCTAGTGAGATGATCTTTGTTAAAGAAGGTGTATTGGAAGCTGGATTTCTTGATACACAAAACAAGGTTTTTCAGAAGTCTTTGAAGGAAGGTGATGTGTTTGTGATCCCTAAGGGCTTGTTCCATTTCTTTCTAAATCGTGGTGTAGAAGTTGCAACTGTGTTGTCTGTGTATAATAGCCAAAATCCAGGGCTGCGATCTCTTAATGCCACACCACCCTCTTCTTCTGAATCAGTAGAGAAGATAAAGAGGAAGCTTACATCACTTTATGAGTTAGAACTTGATAATGTTAATGATTTGAGTTTGGCTGTGTCGGAGATTATTTACAGTTAG 702 0.3917 MVKLRIKMKMKSHSSFFFMFLVVAFSSIQISLADCGNLQDTCPTSSKKQTTFINGFSCNNPSNTLAHDFKTMELSKAGSRDDSGSSINIVTASKFPGLNTLGISIGRTDIEVDGIVNLHNHPRASEMIFVKEGVLEAGFLDTQNKVFQKSLKEGDVFVIPKGLFHFFLNRGVEVATVLSVYNSQNPGLRSLNATPPSSSESVEKIKRKLTSLYELELDNVNDLSLAVSEIIYS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06833 233 SMART Cupin_1_3 75 206 IPR006045 -
Mepo3g06833 233 ProSitePatterns Germin family signature. 114 127 IPR019780 GO:0030145
Mepo3g06833 233 SUPERFAMILY RmlC-like cupins 74 189 IPR011051 -
Mepo3g06833 233 CDD cupin_OxOx 34 209 IPR001929 GO:0030145
Mepo3g06833 233 Gene3D Jelly Rolls 33 221 IPR014710 -
Mepo3g06833 233 PRINTS Germin signature 149 169 IPR001929 GO:0030145
Mepo3g06833 233 PRINTS Germin signature 182 197 IPR001929 GO:0030145
Mepo3g06833 233 PRINTS Germin signature 119 139 IPR001929 GO:0030145
Mepo3g06833 233 Pfam Cupin 83 200 IPR006045 -
Mepo3g06833 233 FunFam germin-like protein subfamily 2 member 1 33 224 - -
Mepo3g06833 233 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 30 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06833 Mepo-Chr3 82085150 82085851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06833 17 209 Miscellaneous Gene Families AT3G05930 36.967 3.20e-35 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06833 - - mtr:112420373 406.757