Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06812 ATGACAAAGTTCAGGAAGCTCAATCGTGAAACGTCTCACCGGTTATCCATGCTCAGAACCATGGTCTCGCAATTGGTGAGGCATGAACGCATTGAAACTACTATTACCAAGGCTAAGGAGGTTAGAAGGCTTGCGGATAATATGGTACAGCTTGGTAAAGAGGGATCTGTATGTGCTGCAAGGCGTGCTGCTAGTTTCGTGCGAGGAGACGATGTACTTCACAAGCTGTTTACAGAACTGGCTTATCGATACAAGGATAGAACTGGTGGATACACTAGGGTGCTACGGACTCGCATTCGAGTTGGTGATGCTGCACCAATGGCCTATATTGAGCTTATTGATCGCGATAATGAGCTTAGGCAGTCAAAGCCACCAACTCCTCAACCACCGCAGAGAGCACCCCTTGATCCCTGGACACGATCTCGTCTTACCAGGCAGTTTGCGCCTCCCAAAGTGGAAAAATCTGATTCTGATTCTGATTTAATTTGA 489 0.4724 MTKFRKLNRETSHRLSMLRTMVSQLVRHERIETTITKAKEVRRLADNMVQLGKEGSVCAARRAASFVRGDDVLHKLFTELAYRYKDRTGGYTRVLRTRIRVGDAAPMAYIELIDRDNELRQSKPPTPQPPQRAPLDPWTRSRLTRQFAPPKVEKSDSDSDLI 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06812 162 Gene3D Ribosomal protein L17 1 113 IPR036373 GO:0003735|GO:0005840|GO:0006412
Mepo3g06812 162 Pfam Ribosomal protein L17 17 113 IPR000456 GO:0003735|GO:0005840|GO:0006412
Mepo3g06812 162 NCBIfam 50S ribosomal protein L17 4 114 IPR000456 GO:0003735|GO:0005840|GO:0006412
Mepo3g06812 162 Hamap 50S ribosomal protein L17 [rplQ]. 2 113 IPR000456 GO:0003735|GO:0005840|GO:0006412
Mepo3g06812 162 FunFam 50S ribosomal protein L17 1 113 - -
Mepo3g06812 162 MobiDBLite consensus disorder prediction 118 162 - -
Mepo3g06812 162 PANTHER RIBOSOMAL PROTEIN L17 2 133 IPR000456 GO:0003735|GO:0005840|GO:0006412
Mepo3g06812 162 MobiDBLite consensus disorder prediction 147 162 - -
Mepo3g06812 162 SUPERFAMILY Prokaryotic ribosomal protein L17 3 116 IPR036373 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06812 Mepo-Chr3 81886963 81891585 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06812 K02879 - cave:132166345 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06812 3 81886963 81891585 Mepo3g06812 3 81886963 81891585 ECH