Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06794 ATGGCAACAAAAGCTTTGGCCTTCACCCTTTCTCTCAATGACCTCTTTGGTTCCAAGGCGCCGCCACACACCTCTGCAAAAGTTTCTGTCTTCTCTGTCAGATGTTCTTCTGGTAATGGTGAAAGGCCATGGAAAAATTCAGATGCTAGACTTGTGCTGGAAGATGGTTCAATTTGGAAAGCTAAATCATTTGGTGCTTCAGGAACTCAAGTTGGTGAAGTTGTTTTCAATACATCATTGACTGGGTATCAAGAAATTTTAACTGATCCTAGTTATGCTGGCCAGTTTGTGCTGATGACAAATCCACATATTGGGAACACTGGCATAAATTTTGATGATGAGGAATCAGCACAGTGCTTCCTTTCTGGTCTAGTAATTAGAAGTTTGAGTATCAGTACCTCGAACTGGAGATGTGTAAAAGATTTGGGCAATTACTTAAATGAAAGGAATGTCATGGGAATTTATGATGTTGATACACGTGCAATCACACGTAGATTACGGGAAGATGGCAGCCTTATTGGTGTTTTGAGCACCGACAATTCCAAAACAGACGAGGAATTACTTCAGATGTCTAAATCATGGAATATTGTTGGTATTGATCTAATTAGTGGAGTATCGTGCAAGTCTCCATATGAATGGATTGATAGAACAAAGGAAGAATGGGAGTTTAGCTCGAGTGAAGGGTCTAGAGATACTTTCCATGTAGTTGCATACGATTTTGGAATCAAGCATAATATACTTAGGCGTCTAGCATCATATGGCTGTAAAATCACTGTTGTGCCATCTACATGGCCAGCATCCGAAACTTTGAAGTTAAACCCAGATGGTGTACTTTTCAGCAATGGTCCCGGAGATCCTTCTGCTGTTCCTTATGCTGTTGAAACAGTGAAAAATATCATTGGAAAGGTGCCTGTTTTTGGAATTTGCATGGGACATCAATTGCTAGGCCAGGCTTTAGGAGGTACAACCTACAAGATGAAATTTGGTCACCATGGAGGAAATCATCCTGTTCGTAACCTTCGAACTGGCCGTGTTGAAATTAGTTCTCAGAACCACAACTATGCAGTTGACCCTGCCACACTGCCTGAAGGAGTAGAAGTTACTCATATCAATCTCAATGACAGTAGTTGCGCCGGTCTTGCTTTCCCTGCTCAAAAGATTGTGTCTCTTCAGTACCACCCTGAAGCTTCTCCCGGACCTCATGATTCTGACAACGCTTTTCGGGAGTTTATAGAGCTAATGAAGCATGGGAAAAACCAAACACCGAATGAAAACCTACACCAACTACAATCAGTGTAA 1299 0.4165 MATKALAFTLSLNDLFGSKAPPHTSAKVSVFSVRCSSGNGERPWKNSDARLVLEDGSIWKAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGINFDDEESAQCFLSGLVIRSLSISTSNWRCVKDLGNYLNERNVMGIYDVDTRAITRRLREDGSLIGVLSTDNSKTDEELLQMSKSWNIVGIDLISGVSCKSPYEWIDRTKEEWEFSSSEGSRDTFHVVAYDFGIKHNILRRLASYGCKITVVPSTWPASETLKLNPDGVLFSNGPGDPSAVPYAVETVKNIIGKVPVFGICMGHQLLGQALGGTTYKMKFGHHGGNHPVRNLRTGRVEISSQNHNYAVDPATLPEGVEVTHINLNDSSCAGLAFPAQKIVSLQYHPEASPGPHDSDNAFREFIELMKHGKNQTPNENLHQLQSV 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06794 432 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 234 420 - -
Mepo3g06794 432 Pfam Carbamoyl-phosphate synthase small chain, CPSase domain 51 175 IPR002474 -
Mepo3g06794 432 CDD GATase1_CPSase 235 411 IPR035686 -
Mepo3g06794 432 PANTHER CARBAMOYLTRANSFERASE FAMILY MEMBER 45 413 - -
Mepo3g06794 432 PRINTS Glutamine amidotransferase superfamily signature 389 402 - -
Mepo3g06794 432 PRINTS Glutamine amidotransferase superfamily signature 277 286 - -
Mepo3g06794 432 PRINTS Glutamine amidotransferase superfamily signature 304 315 - -
Mepo3g06794 432 PRINTS Anthranilate synthase component II signature 389 402 - -
Mepo3g06794 432 PRINTS Anthranilate synthase component II signature 304 315 - -
Mepo3g06794 432 PRINTS Anthranilate synthase component II signature 277 286 - -
Mepo3g06794 432 SUPERFAMILY Carbamoyl phosphate synthetase, small subunit N-terminal domain 48 193 IPR036480 -
Mepo3g06794 432 SMART CPSase_sm_chain_2 47 177 IPR002474 -
Mepo3g06794 432 Hamap Carbamoyl-phosphate synthase small chain [carA]. 47 418 IPR006274 GO:0004088|GO:0006207|GO:0006541
Mepo3g06794 432 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 321 338 - -
Mepo3g06794 432 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 346 357 - -
Mepo3g06794 432 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 304 320 - -
Mepo3g06794 432 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 235 249 - -
Mepo3g06794 432 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 274 288 - -
Mepo3g06794 432 FunFam Carbamoyl-phosphate synthase small chain 46 195 - -
Mepo3g06794 432 Pfam Glutamine amidotransferase class-I 238 412 IPR017926 -
Mepo3g06794 432 SUPERFAMILY Class I glutamine amidotransferase-like 203 416 IPR029062 -
Mepo3g06794 432 Gene3D - 196 418 IPR029062 -
Mepo3g06794 432 FunFam carbamoyl-phosphate synthase small chain, chloroplastic 196 418 - -
Mepo3g06794 432 NCBIfam glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 49 415 IPR006274 GO:0004088|GO:0006207|GO:0006541
Mepo3g06794 432 Gene3D - 47 195 IPR036480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06794 Mepo-Chr3 81686014 81689683 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06794 K01956 - gmx:100806168 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06794 3 81686014 81689683 Mepo3g06794 3 81686014 81689683 ECH