Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06757 ATGAAGAAGAACCAAAACTCGAACCTGATCCCATCCCTCCCAGACGACGTAGCCATAAACTGCCTTGCACGGGTCCCACGTTCTCATCACACAACCCTCACTCTCGTTTCCAAACCAATCCATTCTCTCCTCTCTTCTCCACTCTTCTTCACCGCTCGTTCTCTCATCCGTTCCACCCAACACATCCTCTACCTCTCTCTCCGCACACACACCACCTCTCTCCAATTCTTCACCCTCCACAACAACCACCGTCTCCTCCCTCTCCCTCCTCTTCCCTCCCCTACAATTGGCTCCGCCTACGCTGTCATCCACCACAAAATCTACCTCATCGGTGGTTCCGTCAACGACGTACCATCTCGTCATGTATGGATCCTTGATTGCCGATTCCACCGTTGGCTCCCCGGTCCCTCCATGCGCGTCGCGCGTGAATTCTCTGCTGCTGGTGTTGTCAACGGAAAAATTTACGTCATCGGCGGTTGCGTGCCGGATAATTTTTCCCGATCAGCAAATTGGTCGGAGGTTTTCGATCCTGTTACAAACCTCTGGGAAAGTGTTCCTAGTCCACCAGAAATTCGTGAGAAATGGATGCACGCCAGCGCCGTCGTAGACGGCAAAGTTTACGCGATGGCTGATCGCGGTGGTGTTTCGTTTGATCCTTATAAGGGCGCGTGGGAGAGCGTGGGGAGAGAGCTTGATATTGGTTGGCGTGGGAGAGCAACTGTTGTGGATGGGATTTTGTATTGCTATGATTATTTAGGGAAAATTAAGGGTTTTGATGCGAAGAAAGGGTTGTGGAAGGAGTTGAAAGGGTTGGATAAGAGTTTACCAAGGTTTCTGTGTGGGGCTACAATGGCTGATGTTGGTGGGAAATTGGTTGTGGTTTGGGAATGTCAAAGGAATTTGAATGGGAAGGGGAATGGGAAGGGGAAAGAAATGGAGATTTGGTGCGCTGAGATTGATGTGAAGAAGAATAAGGATGGTGAATTATGGGGTGAAGTTTGTTGGTTGAATAATGTTCTTTCTGTTCCTAAAGGATCTTCCATTGTTCATTGTTCTTCTGTTGCATTGTGA 1071 0.4911 MKKNQNSNLIPSLPDDVAINCLARVPRSHHTTLTLVSKPIHSLLSSPLFFTARSLIRSTQHILYLSLRTHTTSLQFFTLHNNHRLLPLPPLPSPTIGSAYAVIHHKIYLIGGSVNDVPSRHVWILDCRFHRWLPGPSMRVAREFSAAGVVNGKIYVIGGCVPDNFSRSANWSEVFDPVTNLWESVPSPPEIREKWMHASAVVDGKVYAMADRGGVSFDPYKGAWESVGRELDIGWRGRATVVDGILYCYDYLGKIKGFDAKKGLWKELKGLDKSLPRFLCGATMADVGGKLVVVWECQRNLNGKGNGKGKEMEIWCAEIDVKKNKDGELWGEVCWLNNVLSVPKGSSIVHCSSVAL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06757 356 CDD F-box_AtAFR-like 9 53 - -
Mepo3g06757 356 Gene3D - 54 326 IPR015915 GO:0005515
Mepo3g06757 356 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 4 340 - -
Mepo3g06757 356 Pfam Kelch motif 144 189 IPR006652 GO:0005515
Mepo3g06757 356 Pfam Kelch motif 98 139 IPR006652 GO:0005515
Mepo3g06757 356 SMART kelc_smart 153 204 IPR006652 GO:0005515
Mepo3g06757 356 SMART kelc_smart 106 152 IPR006652 GO:0005515
Mepo3g06757 356 SUPERFAMILY Kelch motif 80 338 IPR015915 GO:0005515
Mepo3g06757 356 SUPERFAMILY F-box domain 3 96 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06757 Mepo-Chr3 81297347 81300689 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06757 13 340 Miscellaneous Gene Families AT4G33900 36.415 1.27e-57 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06757 - - aip:107604821 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06757 3 81297347 81300689 Mepo3g06757 3 81297347 81300689 ECH