Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06735 ATGGGTGATGTGGCACGACAATTGACAATCCGCAAAACAAACCTCTCAAACCTTGAAGAACAACATCGTGTGCGGCGACACAAACACAGTCACAACACAACCTCAACAGCCACAAATCAACGAATCCATGTTTCTTTTCCATTGAATTTGAATCTTGATTCTGATCAACACTACCCAGAAGCAATGTTGAAGAAAGCTTTCAAACCCCCTCGCTTCTTCTTCGGGTTCCGCCGCAACCACAATAACTCTCTCACAACCTCTTCCGTTAGTTCCTATCAACGAGGTATTCGTTTCTGCATTTGGGTAGCTCTCAAATTTGAGAATCTTAGCCATGAACCTTATTGCTTGGTTAACCGTATTCTTTTCCATCAAAATTGGTATTCCATTTACTGGGAAGCTCTTGAGCTTCTCAAGAAAAAAGGTGTTTTAGTTACTTCAGATTCCGTTAGAGCTTTGGTTAGATCTTATTCCTATATGGGTTATACCGAAAAAGCTATTGAATCATTTGTTAGAATGCGCGAATTTGGTGTTGAACCTGATGCTCATATGTATAACACAATTTTGAGAGAAGTGTTGAATGAAAAGTTACTTGAGCTCGCTCTTGCATTGTATACTACCATGCTTAAATCCTATGTTGAGCCTAATTTTTATACTTATAATATGTTGATTGATGGGCTTTGTAAAAGGGGTGAAGTTAAGGGCGCACAGGAGATGCTCGATGAAATGAAGAGAGTTGATGTTGTTCCTTGCGTCCTATCGATGACTTCGATTCTTTATGCGTGTTGCCAGGTGAACAATGTGGATGAGGCACATATGTTGTTTGATAAAATGATGAAAGAAAAAGAAGGGCTTCCACCACCGGATATGATTTCTTGTAATGTTGTTCTTAATGGGTTTTGCAAGACGGGGAGGCTAGAGGAAGCACTTTCTTTTGTGTGGTTAATAAAGAAAGATGGTTTCTCACTTAATCGAAATAGCTATTCCTCTCTTATTAATGGATTTTTTAAGGCTAGGAGATACAGGGAAGCACATGTGTGGTATACCAAGATGTTTAAGGAGGGGATTGTGCCTGATGTTGTTTTGTACGCTATTATGATACGTGGTTTGTCGGAGGAGGGCAGGGTTGGTGAAGCTGGTAAGATGTTAGAGGAGATGACTGAGATAGGTTTAACTCCTGATGCTTATTGCTACAATGCTGTAATTCAAGGTTTATGTGATGTAGGTCTTTTGAATCGAGCACAGTCCCTTCATCTTGAAATTTCCGAGCACAATGTTTGCACACACACAATTCTCATATGTGAAATGTGTAAGCGAGGAATGGTTGCTGAGGCAAAAGAATTATTTAATCGGATGGAGAAGCTTGGATGTGAACCTTCGGTTGTGACCTTCAATGCGCTTATAAATGGACTGTGCAAAGCTAAAAATCTTGAGGAAGCAATGAATTTATTTTACAAGATGGACGTCGGGAGAAGATATTCGTTTCGCATCAGTCTTTCTCAGGGTTCTGTTCAGGTTTCTGATGGTGCTAGTCTCCAGAAAAAGGTGAAGGAAATGTGTGAGGCGGGACAAATTTTGAAGGCTTACAAGTTAATCACTGATCATGCTGGCGAGCTTAGGCATGACATCATTTCATACAACATTCTAATCAATGCCTTTTGCTTGGATCGTGAAGTTACCGCTGCTTATAATCTTTTTGAGGAACTGCAAAAGAGGGGTCTCTCACCCGATAGTGTTACATATGGGACAATTATCAAAGGGCTGTTCATAGTTGACAGAGAAGATGATGCCTTTAAGGTTTTTCAGCGTATGCAGAAGACTGGCTCTGAACCTACCCTCTCAGTTTATAGAACACTTATGACTTGTTTGTGTAGAAAGAGCAAGGTCTCACGGGCATTCACTCTTTATTTGGAATATTTGAAGAGCCTTCCTAGTCGGGACAACGACTCAATCAGTACTCTAGAAAAATATTTATTCGGAGAAAAATTGGAACAAGTGATTCGAGGTTTACTTGAACTGGACTTCAAGGCCAGAGATTTTAAATTAGCTCCATATACTATTCTACTTATTGGGTTCTGTCAGGCAGGAAAAGTATCTGAAGCATTAATTATATTCTCTGTTCTTGATGAGTTCAATATCAAAATCAATGCTACAAGTTGTGTACATTTGATCAGAGGTCTTTGTAAGGAACAGAGGCTATATGACGCAGTAAAAATATTTTTTTACAGTCTTGATAAGGGTTTCATGTTGAAGCCAATGATTTGTAATCACCTCCTCACGTGTCTTCTTAATTCCCAAGCTTATAAGGAGTGTGCTGTTGATCTTATTGGTAGGATGGAATCTTTTGGATACCATTTAAATTCAGAAGAATTTGCAACGACATTGACACTTTTACACCAATACTGA 2403 0.3933 MGDVARQLTIRKTNLSNLEEQHRVRRHKHSHNTTSTATNQRIHVSFPLNLNLDSDQHYPEAMLKKAFKPPRFFFGFRRNHNNSLTTSSVSSYQRGIRFCIWVALKFENLSHEPYCLVNRILFHQNWYSIYWEALELLKKKGVLVTSDSVRALVRSYSYMGYTEKAIESFVRMREFGVEPDAHMYNTILREVLNEKLLELALALYTTMLKSYVEPNFYTYNMLIDGLCKRGEVKGAQEMLDEMKRVDVVPCVLSMTSILYACCQVNNVDEAHMLFDKMMKEKEGLPPPDMISCNVVLNGFCKTGRLEEALSFVWLIKKDGFSLNRNSYSSLINGFFKARRYREAHVWYTKMFKEGIVPDVVLYAIMIRGLSEEGRVGEAGKMLEEMTEIGLTPDAYCYNAVIQGLCDVGLLNRAQSLHLEISEHNVCTHTILICEMCKRGMVAEAKELFNRMEKLGCEPSVVTFNALINGLCKAKNLEEAMNLFYKMDVGRRYSFRISLSQGSVQVSDGASLQKKVKEMCEAGQILKAYKLITDHAGELRHDIISYNILINAFCLDREVTAAYNLFEELQKRGLSPDSVTYGTIIKGLFIVDREDDAFKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYLEYLKSLPSRDNDSISTLEKYLFGEKLEQVIRGLLELDFKARDFKLAPYTILLIGFCQAGKVSEALIIFSVLDEFNIKINATSCVHLIRGLCKEQRLYDAVKIFFYSLDKGFMLKPMICNHLLTCLLNSQAYKECAVDLIGRMESFGYHLNSEEFATTLTLLHQY 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06735 800 Gene3D Tetratricopeptide repeat domain 497 641 IPR011990 GO:0005515
Mepo3g06735 800 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 424 458 IPR002885 -
Mepo3g06735 800 Gene3D Tetratricopeptide repeat domain 315 421 IPR011990 GO:0005515
Mepo3g06735 800 Gene3D Tetratricopeptide repeat domain 679 799 IPR011990 GO:0005515
Mepo3g06735 800 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 576 610 IPR002885 -
Mepo3g06735 800 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 358 392 IPR002885 -
Mepo3g06735 800 Pfam PPR repeat family 424 472 IPR002885 -
Mepo3g06735 800 Pfam PPR repeat family 287 336 IPR002885 -
Mepo3g06735 800 Pfam PPR repeat family 541 587 IPR002885 -
Mepo3g06735 800 Pfam PPR repeat family 357 406 IPR002885 -
Mepo3g06735 800 Pfam PPR repeat 212 243 IPR002885 -
Mepo3g06735 800 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 323 357 IPR002885 -
Mepo3g06735 800 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 180 214 IPR002885 -
Mepo3g06735 800 SUPERFAMILY HCP-like 334 484 - -
Mepo3g06735 800 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 541 575 IPR002885 -
Mepo3g06735 800 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 288 322 IPR002885 -
Mepo3g06735 800 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 145 179 IPR002885 -
Mepo3g06735 800 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 215 249 IPR002885 -
Mepo3g06735 800 NCBIfam pentatricopeptide repeat 217 249 IPR002885 -
Mepo3g06735 800 NCBIfam pentatricopeptide repeat 461 486 IPR002885 -
Mepo3g06735 800 NCBIfam pentatricopeptide repeat 290 323 IPR002885 -
Mepo3g06735 800 NCBIfam pentatricopeptide repeat 426 460 IPR002885 -
Mepo3g06735 800 NCBIfam pentatricopeptide repeat 578 611 IPR002885 -
Mepo3g06735 800 NCBIfam pentatricopeptide repeat 543 577 IPR002885 -
Mepo3g06735 800 NCBIfam pentatricopeptide repeat 326 359 IPR002885 -
Mepo3g06735 800 NCBIfam pentatricopeptide repeat 360 393 IPR002885 -
Mepo3g06735 800 NCBIfam pentatricopeptide repeat 255 281 IPR002885 -
Mepo3g06735 800 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 459 493 IPR002885 -
Mepo3g06735 800 Pfam PPR repeat 151 177 IPR002885 -
Mepo3g06735 800 Pfam PPR repeat 684 709 IPR002885 -
Mepo3g06735 800 Pfam PPR repeat 614 637 IPR002885 -
Mepo3g06735 800 Pfam PPR repeat 253 280 IPR002885 -
Mepo3g06735 800 PANTHER MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1 151 489 - -
Mepo3g06735 800 Gene3D Tetratricopeptide repeat domain 245 314 IPR011990 GO:0005515
Mepo3g06735 800 Gene3D Tetratricopeptide repeat domain 422 488 IPR011990 GO:0005515
Mepo3g06735 800 Gene3D Tetratricopeptide repeat domain 100 244 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06735 Mepo-Chr3 81043676 81047667 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06735 439 794 Glycosyltransferase AT1G05670 25.410 5.31e-19 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06735 - - lang:109340115 821.617