Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06732 ATGGCCGTTCGAACCCTACTGAGCAAAAAAACCCTAACCACCGTCCTCCGCAATGATCCAAAACCAATAGGAGCAGCCATAACTCAATCCCGTGGCTTACATGTCTTCACACTCCCTGATCTCGCTTATGACTATGGCGCTTTGGAGCCTGTCATCAGCGGCGAAATCATGCAGATTCACCATCAGAAACATCATCAGACTTACATTACAAACTATAACAAAGCGCTTGAACAGCTTCACGATTCTGTTGCCAAAGCTGATTCCTCAACCACCGTTAAGCTTCAGAATGCTATCAAGTTCAACGGTGGAGGTCATATCAACCATTCTATTTTCTGGAAAAATCTGGCTCCTGTTCGGGAAGGAGGTGGTGAACCTCCAAAGGAAGCCCTAGGATGGGCAATTGACACAAATTTTGGTTCTTTAGAAGCGTTGATACAAAAGATTAATGCAGAAGGTGCGGCTCTTCAAGGGTCTGGATGGGTGTGGCTTGCTGTTGACAAAGAATTGAAGAGGCTTGTGGTTGAAACCACTGCAAACCAGGACCCATTGGTTACTAAAGGACCAAGTTTGGTTCCATTGCTTGGTATAGATGTTTGGGAACATGCCTACTACTTACAGTACAAGAACGTCAGACCAGACTATTTGAAGAACATTTGGAAAGTTATTAACTGGAAATATGCCAGTGAAGTGTATGATAGCGCTTTCTAA 708 0.4421 MAVRTLLSKKTLTTVLRNDPKPIGAAITQSRGLHVFTLPDLAYDYGALEPVISGEIMQIHHQKHHQTYITNYNKALEQLHDSVAKADSSTTVKLQNAIKFNGGGHINHSIFWKNLAPVREGGGEPPKEALGWAIDTNFGSLEALIQKINAEGAALQGSGWVWLAVDKELKRLVVETTANQDPLVTKGPSLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYASEVYDSAF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06732 235 PANTHER SUPEROXIDE DISMUTASE 2 28 233 - -
Mepo3g06732 235 Pfam Iron/manganese superoxide dismutases, C-terminal domain 126 228 IPR019832 GO:0004784|GO:0006801|GO:0046872
Mepo3g06732 235 Gene3D - 117 234 IPR036314 -
Mepo3g06732 235 PRINTS Manganese superoxide dismutase signature 39 50 IPR001189 GO:0004784|GO:0006801|GO:0046872
Mepo3g06732 235 PRINTS Manganese superoxide dismutase signature 155 163 IPR001189 GO:0004784|GO:0006801|GO:0046872
Mepo3g06732 235 PRINTS Manganese superoxide dismutase signature 60 73 IPR001189 GO:0004784|GO:0006801|GO:0046872
Mepo3g06732 235 PRINTS Manganese superoxide dismutase signature 99 112 IPR001189 GO:0004784|GO:0006801|GO:0046872
Mepo3g06732 235 PRINTS Manganese superoxide dismutase signature 195 207 IPR001189 GO:0004784|GO:0006801|GO:0046872
Mepo3g06732 235 PIRSF MnSOD_FeSOD 12 235 IPR001189 GO:0004784|GO:0006801|GO:0046872
Mepo3g06732 235 Gene3D Fe,Mn superoxide dismutase (SOD) domain 53 116 IPR036324 -
Mepo3g06732 235 SUPERFAMILY Fe,Mn superoxide dismutase (SOD), N-terminal domain 33 117 IPR036324 -
Mepo3g06732 235 FunFam Superoxide dismutase 117 235 - -
Mepo3g06732 235 FunFam Superoxide dismutase 53 116 - -
Mepo3g06732 235 ProSitePatterns Manganese and iron superoxide dismutases signature. 197 204 IPR019833 GO:0004784|GO:0006801|GO:0046872
Mepo3g06732 235 SUPERFAMILY Fe,Mn superoxide dismutase (SOD), C-terminal domain 121 233 IPR036314 -
Mepo3g06732 235 Pfam Iron/manganese superoxide dismutases, alpha-hairpin domain 36 116 IPR019831 GO:0004784|GO:0006801|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06732 Mepo-Chr3 81025025 81030281 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06732 K04564 - gmx:100785490 415.616