Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06724 ATGGGGTTCCAGAAACACAACAAGAGTGTTTTGGTTCACTTGTTCATTCTTTTCATCTATGTTTCCTCTTCTGTTTTTGTGTCAGCAAGAGTTGTACAACCTCTCTTGCAAAATTACGGAAAACCCATTTTCAGATCAAATTTTCACTCTATTTATGATACTTCAAACTATGGAGTTTTTCAGCTTAGTAATGGTTTGGCTCTTACTCCTCAGATGGGATGGAACAGCTGGAACTTCTTTGCATGCAATATCAATGAAACGGTTATTAAGGAAACAGCTGATGCACTGGTATCAACAGGGTTGGCCAAGTTGGGTTATGTGTACGTCAATATAGACGATTGCTGGTCTTCTGTGACAAGAAATTTAAAGGGTGACCTGGTCCCTGATCGTAAGACATTTCCATCAGGAATCAAAGCACTTGCCGATTATGTGCATGGGAAGGGACTCAAGCTTGGCATATATTCCGATGCTGGGGCTTTTACATGTCAAGTCCGACCAGGATCAATTTTCCACGAAAATGGGGATGCAGATTTATTTGCCTCTTGGGGCGTAGATTATTTGAAGTATGACAATTGTTACAATCTGGGCATCCCTCCAAAAAAACGATATCCACCTATGCGCGATGCCCTCAATGAAACTGGTCATAAAATTTTCTATTCAATCTGTGAATGGGGTGTTGACGATCCTGCTTTATGGGCAGGCACAGTTGGTAATAGTTGGCGCACAACCGATGACATCAATGATACATGGGCAAGCATGACAACTATTGCCGATCTTAATGACCGATGGGCTGCATATGCCGGTCCTGGAGGATGGAATGACCCCGATATGTTGGAAGTTGGCAATGGTGGCATGACTTACCAGGAATACCGTGCTCACTTCAGCATATGGGCTTTAGCAAAGGCTCCTCTTTTGATTGGTTGCGATGTAAGAAATATGACCGCCGAAACATTTGAAATTTTAAGCAATAAAGAAGTCATTGCTATAAATCAAGACTCGCTTGGAGTCCAAGGAAGGAAAGTTCAAGTTGCTGGAATAGATGGTTGTAGTCAGGTCTGGGCAGGTCCTTTATCAGGAAATCGTTTGGCTGTTGCTCTTTGGAATCGATGCTCAAAAGTTGCGACTATAACAGCATCATGGGAAGCACTTGGGCTTGAATCTGGAATTCATGTTTCTGTAAGGGATTTGTGGCAGCACAAGGTAATAAATGGCGATGCAGTGTCATCATTCAGTGCTAGAGTTGATTCTCACGCTTGTGAACTGTACATTTTCACTCCATCTACAGCATCTTACTCTGCACAGTAG 1305 0.4261 MGFQKHNKSVLVHLFILFIYVSSSVFVSARVVQPLLQNYGKPIFRSNFHSIYDTSNYGVFQLSNGLALTPQMGWNSWNFFACNINETVIKETADALVSTGLAKLGYVYVNIDDCWSSVTRNLKGDLVPDRKTFPSGIKALADYVHGKGLKLGIYSDAGAFTCQVRPGSIFHENGDADLFASWGVDYLKYDNCYNLGIPPKKRYPPMRDALNETGHKIFYSICEWGVDDPALWAGTVGNSWRTTDDINDTWASMTTIADLNDRWAAYAGPGGWNDPDMLEVGNGGMTYQEYRAHFSIWALAKAPLLIGCDVRNMTAETFEILSNKEVIAINQDSLGVQGRKVQVAGIDGCSQVWAGPLSGNRLAVALWNRCSKVATITASWEALGLESGIHVSVRDLWQHKVINGDAVSSFSARVDSHACELYIFTPSTASYSAQ 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06724 434 FunFam Alpha-galactosidase 335 427 - -
Mepo3g06724 434 Gene3D - 335 427 IPR013780 -
Mepo3g06724 434 PRINTS Glycosyl hydrolase family 27 signature 267 286 IPR002241 GO:0004553|GO:0005975
Mepo3g06724 434 PRINTS Glycosyl hydrolase family 27 signature 288 309 IPR002241 GO:0004553|GO:0005975
Mepo3g06724 434 PRINTS Glycosyl hydrolase family 27 signature 175 192 IPR002241 GO:0004553|GO:0005975
Mepo3g06724 434 PRINTS Glycosyl hydrolase family 27 signature 64 83 IPR002241 GO:0004553|GO:0005975
Mepo3g06724 434 PRINTS Glycosyl hydrolase family 27 signature 141 162 IPR002241 GO:0004553|GO:0005975
Mepo3g06724 434 PRINTS Glycosyl hydrolase family 27 signature 100 115 IPR002241 GO:0004553|GO:0005975
Mepo3g06724 434 PRINTS Glycosyl hydrolase family 27 signature 202 220 IPR002241 GO:0004553|GO:0005975
Mepo3g06724 434 CDD GH27 70 332 IPR002241 GO:0004553|GO:0005975
Mepo3g06724 434 ProSitePatterns Alpha-galactosidase signature. 105 121 IPR000111 GO:0004553|GO:0005975
Mepo3g06724 434 Gene3D Aldolase class I 62 334 IPR013785 -
Mepo3g06724 434 Pfam Alpha galactosidase A 69 332 IPR002241 GO:0004553|GO:0005975
Mepo3g06724 434 FunFam Alpha-galactosidase 62 334 - -
Mepo3g06724 434 SUPERFAMILY Glycosyl hydrolase domain 327 426 - -
Mepo3g06724 434 SUPERFAMILY (Trans)glycosidases 62 332 IPR017853 -
Mepo3g06724 434 Pfam Alpha galactosidase C-terminal beta sandwich domain 348 423 IPR041233 -
Mepo3g06724 434 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 16 426 IPR002241 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06724 Mepo-Chr3 80975624 80980640 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06724 3 432 Glycoside Hydrolase AT3G56310 70.276 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06724 K07407 - gmx:100784072 785.793