Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06640 ATGTCAATGGCGACTCACTTCAACTTCCACACAAACCTTTCTTCTTCTTCCACGCGGTGCCTTTCTTTACTCTCTCTTCCTCCTCAATTTTCTTCCATAAAGACAAAGTTACCCTCCACAACATTCTTGACTGGAGAAGGAGGCACATCACAATTGCTGAAATTCAACAACTATGCCGCCACAACAACTACAACCAAACGCCGCGGCGGTTCACTCTCCGTTGTTTCTATGTCATGGGACGGTCCACTCTCTTCCGTCAAATTAATCATCCAGGGTAAAAATATGCAGCTGAATGATGCTGTGAAACAGCACGTAGAGGAGAAAGTGGGAAGAGCAGTTCAGAAGCACAGCTATTTAGTCAGGGAAGTTGATGTCAGGCTATCTACTCGCGGTGGAGGAGAGTTTGGTCGAGGACCTAGAACACGTAGATGCGAGGTTACTTTGTTTACCAAGAGGCATGGGGTGGTGAGGGCTGAGGAACACGCTGAAACTACCTATGCCAGTATAGATTTGGTGTCCTCTGTCATTCAGAGAAAGCTGAGAAAGATTAAGGAAAAAGAAACTGATCATGGTCGCCACATGAAGGGATCCAATAGGTTGAAATTTAGAGAGGCTGTATTGCCAATACCCACCGAGGACGAGGAGGATGAAACTGAAATATCCCCACAGAAGGAGGAAGAAGAAGAACTTATTGAAGAGGTTGTTCGGACAAAATACTTCGACATGCCTCCTTTAACCGTGTTTGAAGCAATTGACCAGTTGGAAATGGTTGCTCATGACTTCTATGCTTTTCGAAATGAAGAATCTGGGGAGGTTAATATTGTATACAAAAGAAAAGAAGGAGGTTATGGACTCATTATACCTAAAGGAAACGGTGAAGCAGAAAAATTGGAGCCTATAGTGGTTGAACCGGCTAAAGAACCCTCTCTGCAAGAATGA 939 0.443 MSMATHFNFHTNLSSSSTRCLSLLSLPPQFSSIKTKLPSTTFLTGEGGTSQLLKFNNYAATTTTTKRRGGSLSVVSMSWDGPLSSVKLIIQGKNMQLNDAVKQHVEEKVGRAVQKHSYLVREVDVRLSTRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEHAETTYASIDLVSSVIQRKLRKIKEKETDHGRHMKGSNRLKFREAVLPIPTEDEEDETEISPQKEEEEELIEEVVRTKYFDMPPLTVFEAIDQLEMVAHDFYAFRNEESGEVNIVYKRKEGGYGLIIPKGNGEAEKLEPIVVEPAKEPSLQE 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06640 312 SUPERFAMILY Ribosome binding protein Y (YfiA homologue) 87 193 IPR036567 -
Mepo3g06640 312 Pfam Sigma 54 modulation protein / S30EA ribosomal protein 89 186 IPR003489 GO:0044238
Mepo3g06640 312 CDD RaiA 87 186 IPR003489 GO:0044238
Mepo3g06640 312 Gene3D - 244 293 IPR038416 -
Mepo3g06640 312 FunFam Ribosome-binding factor PSRP1, chloroplastic 88 191 - -
Mepo3g06640 312 Gene3D - 87 191 IPR036567 -
Mepo3g06640 312 NCBIfam ribosome-associated translation inhibitor RaiA 87 191 IPR003489 GO:0044238
Mepo3g06640 312 Hamap Ribosome hibernation promoting factor [hpf]. 86 289 IPR034694 -
Mepo3g06640 312 FunFam ribosome-binding factor PSRP1, chloroplastic 244 295 - -
Mepo3g06640 312 Pfam Sigma 54 modulation/S30EA ribosomal protein C terminus 232 285 IPR032528 -
Mepo3g06640 312 PANTHER 30S RIBOSOMAL PROTEIN 74 298 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06640 - - mtr:11425207 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06640 3 80293595 80295555 Mepo3g06640 3 80293595 80295555 ECH