Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06569 ATGGGTGAATGGCATGATTGGCAATCTCTTCTTCAATCAATTTTCGTCGGTTTAATCTTCTCTTACCTTCTTGCAAAACTCATATCCATCGTCGTTTCATTCAACAACGAAAATCTCACAATCACACGCAACACAAACCCCAACGCCGTCGTTTCACACGATGATACCAAACAAGACGACGTCGTTTCTGATCCCGGACACCGTCCCGAAGCCGAAGCTGAGTCGGTTATGGCTGAGCAAGGTAGCATCAGAAACGAAAGCGTTGACGGTGGTGATGATGATTACGATGATGATTGGGAAGGTGTGGAGAGTACTGAGTTAGATGAGGCTTTCAGCGCTGCTACTGCTTTTGTTGCTGCCGCCGCCGCGGACCGGCTTTCGCAGAAGGTGTCTAATGATGTTCAGCTTCAGCTTTATGGGTTGTATAAGATTGCTACTGAAGGTCCTTGTAGTACAGCTCAGCCTTCTCCTCTCAAAATGACGGCTCGTGCTAAATGGCAAGCGTGGCAGAAATTGGGTGCTATGCCTCCTGAGGATGCAATGCAGAAGTACATTGACATTGTGTCGGAGCTATATCCTACTTGGCTTGATGGTGCACCTTTGAGAAGTAAAACCGGCGACGGTGGTGGCCCAAGTTCAGAGGCTCGGGGACCAATGGGACCAGTATTCAGCTCTTTTGTTTACGAAGAGGAATGTGGCAGTGACTCGAAAATGGATGCCATTCACGGATTTGCTAGAGAGGGAGATATGACTAATCTACTAAAGTGTATTGAAAGTGGAGTTTCAGTGAATTTGAAGGACAGTGAAGGCCGAACACCGCTACACTGGGCTGTGGATCGTGGTCACCTTAATGTCACAGAGCTGCTGGTTGGCAGGAATGCTGATGTAAATGTCAAGGATAATGATGGACAAACTCCACTGCATTATGCTGTTACGTGCGAGAGAGAAGCCATAGCCGAATACTTGGTGAAGCATAGTGCAGACATCCATTCAGAAGACAATGATGGCAGTTCATCGCGTGACATCTGTAGTTCTAAGTGGCCGTTTATGCAGCATGAGGAAGAAGTAAAATGA 1074 0.4721 MGEWHDWQSLLQSIFVGLIFSYLLAKLISIVVSFNNENLTITRNTNPNAVVSHDDTKQDDVVSDPGHRPEAEAESVMAEQGSIRNESVDGGDDDYDDDWEGVESTELDEAFSAATAFVAAAAADRLSQKVSNDVQLQLYGLYKIATEGPCSTAQPSPLKMTARAKWQAWQKLGAMPPEDAMQKYIDIVSELYPTWLDGAPLRSKTGDGGGPSSEARGPMGPVFSSFVYEEECGSDSKMDAIHGFAREGDMTNLLKCIESGVSVNLKDSEGRTPLHWAVDRGHLNVTELLVGRNADVNVKDNDGQTPLHYAVTCEREAIAEYLVKHSADIHSEDNDGSSSRDICSSKWPFMQHEEEVK 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06569 357 Gene3D - 101 212 IPR014352 -
Mepo3g06569 357 MobiDBLite consensus disorder prediction 53 74 - -
Mepo3g06569 357 ProSiteProfiles Ankyrin repeat region circular profile. 302 334 - -
Mepo3g06569 357 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6 6 347 - -
Mepo3g06569 357 MobiDBLite consensus disorder prediction 46 95 - -
Mepo3g06569 357 SMART ANK_2a 302 331 IPR002110 GO:0005515
Mepo3g06569 357 SMART ANK_2a 236 265 IPR002110 GO:0005515
Mepo3g06569 357 SMART ANK_2a 269 298 IPR002110 GO:0005515
Mepo3g06569 357 Pfam Acyl CoA binding protein 108 188 IPR000582 GO:0000062
Mepo3g06569 357 SUPERFAMILY Acyl-CoA binding protein 106 196 IPR035984 GO:0000062
Mepo3g06569 357 Gene3D - 229 347 IPR036770 -
Mepo3g06569 357 ProSiteProfiles Acyl-CoA-binding (ACB) domain profile. 107 197 IPR000582 GO:0000062
Mepo3g06569 357 PRINTS Ankyrin repeat signature 318 332 IPR002110 GO:0005515
Mepo3g06569 357 PRINTS Ankyrin repeat signature 270 285 IPR002110 GO:0005515
Mepo3g06569 357 ProSiteProfiles Ankyrin repeat profile. 302 334 IPR002110 GO:0005515
Mepo3g06569 357 SUPERFAMILY Ankyrin repeat 235 344 IPR036770 -
Mepo3g06569 357 ProSiteProfiles Ankyrin repeat profile. 269 301 IPR002110 GO:0005515
Mepo3g06569 357 PRINTS Acyl-coA-binding protein signature 153 168 IPR000582 GO:0000062
Mepo3g06569 357 PRINTS Acyl-coA-binding protein signature 130 148 IPR000582 GO:0000062
Mepo3g06569 357 PRINTS Acyl-coA-binding protein signature 174 191 IPR000582 GO:0000062
Mepo3g06569 357 ProSiteProfiles Ankyrin repeat region circular profile. 269 301 - -
Mepo3g06569 357 Pfam Ankyrin repeats (3 copies) 242 333 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06569 Mepo-Chr3 79616551 79621885 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06569 6 355 Acyl Lipid Metabolism Gene Families AT5G53470 61.714 5.61e-143 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06569 - - psat:127081845 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06569 3 79616551 79621885 Mepo3g06569 3 79616551 79621885 ECH