Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06563 ATGGAAGCTTCGTCCTGTTTTGTTCCATCACCCTCTTTCATTGGATTCAGGACGCTCTCATTGCAAGAGTTCAAAATCAAAACAATAATAAGCTTTTCAGTTTGTAATCAAAAGCAAAATTACAATGAAAAGCTATACATTATACCCATTAGGACCATTTCTCGCTTCTGCATTTCAAGATCTTTCGCGAAGTCATTGGAACTTGGAGGGACGAGACCACGAAGCGATGCTCGTTTAGTTTACTCAGCTCCCGACAAAGACAATCAGAGCAACTTTGAGAAAGAATTGGAAGAATTGTTCGATGAAGTGAAAAGAATGATTAAGATGGGAAAGAAAACTGATGCCATAGACCTGCTTAATGCAAATTATGAAATGGTGAAAGTGCGGCTTAATGCTGGCACTAAAGGCGTAGAGGAGGCTGCGATTTTAGACATATTAGCACTTGGTTACATTGCTGTTGGAGACTTGAAGTCTGTTGGTTATCTGTTAAACTCGTTGAAAGAAGTTGTTGATACCTTAAAGGACGATGCACCACATCTAGATTCAATACTTATGCATATGGGAAATATGTATGCAACGTTGAAAAAGTTTGAAGAGTCACTGCACACATATCAAAGGGCTGTCTACATTGTGGAGACGATTTATGGTAACGATAGTACTATTCTTGTCACACCCTATTTGGGTATGGCAAAAGCTCTTGGTTCAATTGGAAAAGCAAAAAAAGCAATAGAGATATACCAACATGTAATCACTCTTTTGGAATCAAATAGAGGTGCTGAAAGTAAAGATTTGGTTGTACCTTTACTTAGTCTTGGCAATCTTTTACTGAAAGAAGGAAGAGCCAATGATGCCGAAAGTCGTTTTACTAGGGTTCTAAACATATACAAAAAAGTATACGGGGAAAATGATGGAAGAATTGGAATGGCTATGAGTTCTCTAGCCCAAGTGAAGTGTGCTCTAGGAAAATCAGATGAAGCGATTCATTTATTCAAACATGCTCTCAAGGTCATGAAGGATTCAAATTACATGTCGCCGGACAACAGTATAATGGAAAAGATGAGGGTAGATCTAGCTGAATTACTCCATACTTCTGGGAGAGGACAAGAAGGAAGAGAGATATTAGAGGAGTGCCTATTGATTACAGAGAGGTACAAAGGAAAGGAGCATCCCAGCTTAGCAACACATATGACAAATCTTGCAACTTCGTACACACGGTCAAAGAATTATGCAGAGACTGAGCATTTGCTGAGAAGAAGTTTGCAAATCATGATAAAGCATAACGGAACTGATGACCAGTCCATTAGCTTCCCTATGTTGCAACTTGCAGCTACACTATACCATTTGAAAAATGATGAAGAAGCAGAGAAACTTGCCCTGGAGGTTTTACGCATCCGTGAAAAGGCATTTGGAGATTATTCTCTTCCTGTTGGGGAGGCTTTGGACTGCTTAGTTTCTATTCAAGCCAGACTTGGTAAAGATGACAGCGAGTTACTTGAGCTGCTTAGAAGAATCCTGATTATCCAAGAGAAAGGATTCGGACATGAGAGCGAGCAGGTTTTGGTTACCCTTAAAAAAATTGTATACTACTTAGATAAGTTAGGGAGAAAAGATGAAAAGCTTCCCCTGCAGAGAAGGTTATCCGTGCTTAGGAAGAAATATAAGCATATGATTCATCAGTAA 1680 0.3923 MEASSCFVPSPSFIGFRTLSLQEFKIKTIISFSVCNQKQNYNEKLYIIPIRTISRFCISRSFAKSLELGGTRPRSDARLVYSAPDKDNQSNFEKELEELFDEVKRMIKMGKKTDAIDLLNANYEMVKVRLNAGTKGVEEAAILDILALGYIAVGDLKSVGYLLNSLKEVVDTLKDDAPHLDSILMHMGNMYATLKKFEESLHTYQRAVYIVETIYGNDSTILVTPYLGMAKALGSIGKAKKAIEIYQHVITLLESNRGAESKDLVVPLLSLGNLLLKEGRANDAESRFTRVLNIYKKVYGENDGRIGMAMSSLAQVKCALGKSDEAIHLFKHALKVMKDSNYMSPDNSIMEKMRVDLAELLHTSGRGQEGREILEECLLITERYKGKEHPSLATHMTNLATSYTRSKNYAETEHLLRRSLQIMIKHNGTDDQSISFPMLQLAATLYHLKNDEEAEKLALEVLRIREKAFGDYSLPVGEALDCLVSIQARLGKDDSELLELLRRILIIQEKGFGHESEQVLVTLKKIVYYLDKLGRKDEKLPLQRRLSVLRKKYKHMIHQ 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06563 559 Coils Coil 89 109 - -
Mepo3g06563 559 SMART tpr_5 265 298 IPR019734 GO:0005515
Mepo3g06563 559 SMART tpr_5 435 468 IPR019734 GO:0005515
Mepo3g06563 559 SMART tpr_5 223 256 IPR019734 GO:0005515
Mepo3g06563 559 SMART tpr_5 393 426 IPR019734 GO:0005515
Mepo3g06563 559 SMART tpr_5 307 340 IPR019734 GO:0005515
Mepo3g06563 559 SMART tpr_5 181 214 IPR019734 GO:0005515
Mepo3g06563 559 SUPERFAMILY TPR-like 182 422 IPR011990 GO:0005515
Mepo3g06563 559 SUPERFAMILY TPR-like 355 492 IPR011990 GO:0005515
Mepo3g06563 559 ProSiteProfiles TPR repeat profile. 181 214 IPR019734 GO:0005515
Mepo3g06563 559 Gene3D Tetratricopeptide repeat domain 352 559 IPR011990 GO:0005515
Mepo3g06563 559 Pfam MalT-like TPR region 176 461 IPR041617 -
Mepo3g06563 559 Gene3D Tetratricopeptide repeat domain 152 351 IPR011990 GO:0005515
Mepo3g06563 559 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) 90 554 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06563 - - aprc:113852595 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06563 3 79551754 79555148 Mepo3g06563 3 79551754 79555148 ECH