Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06550 ATGGAGTCTCTAGAACTCCCCCGTCTTTTTCTCCATCATCTTCGTGCATCTTCAGCTCTAGCTCCAACTCGACCTCATAGTAGCACCAATTCACGATTCTTACCACAATTGGGGTTTCCTTCTAAGCTCAAAAACCCCACCTTACGCTCTATTTCCGGTGCTTCACAAGACGGACCTATTTCCTTCGAAGATGAAACCCAACAACTCCGTCATGATGATGATGATGATGATGATGATGATGATAAGGCTCGTTTATTATCCACAGAGATTGACCATTTTGGTTCTCTTGTTGCCTTTCGCTTGACTCCTCATGATTCTGGGAAAACTGCTGAAACTCAAGGGAATTTAAGGAGTGATGAAGTTGAAAAACCGGAGATTGGGAGTGCAGAAGAAGAGAAGGCTCAAACTATAGTGACCCGCAACATAGTTTTTGTTACATCTGAAGCTGCACCGTATTCTAAGACCGGCGGCCTTGCAGATGTTTGTGGTTCTTTGCCAATAGCACTTGCAGGTCGCGGACACCGTGTTATGGTTATCTCTCCTAGATACATACACGGAACTGCTGCAGATAGTAAGTTTTCTAGTGCAGTTGATCTTGATAACACTATCAAGGTATTTTGCTTTGGAGGCGCTCAAGAAGTTGGCTTTTATCATGAGTATAGAGAAGGTGTTGATTGGGTATTTGTGGATCACCCTTCATTCCATAGACCAGGGAATCCTTATGGAGACAAGCACGGGACGTTTAAGGATAATCAGTTTAGGTTCACTTTACTTTCCCATGCAGCATGTGAAGCCCCATTAGTGCTTCCATTGGGAGGGTTCACTTACGGAGAAAAATGCTTATTCCTCGTTAATGATTGGCATGCCAGTTTAGTTTCAGTACTTTTGGCATCAAAGTATCGTCCACATGGGGTATATAAGGATGCACGTAGTATATTAGTGATTCACAATATTGCACACCAGGGAGTGGAACCTGCAATTACATATAGCAATTTGGGGTTGCCTCAAGAATGGTATGGAGCACTGGGATGGGTATTCCCTACTTGGGCGAGGACACATGCTCTTGACACAGGCGAAGCTGTCAATTTTCTAAAAGGCGCCATTGTTACTGCTGATCGGATAGTAACAGTAAGCAAGGGTTATTCCTGGGAGATAACAACTACAGAAGGTGGATTTGGTCTACAGGAGATACTACGAGATAGAAAGAGTATTCTGAGCGGGATCACAAATGGAATTGATGTTACTGAATGGGACCCATTATCTGATGAACATATTGCTTCCAACTATTCTGCTGACGACCTTTCTGGAAAGGTGAAATGTAAGATTGCCTTGCAGAAGGAGTTGGGTCTTCCAGTGCGACCTGATTGTCCAGTGATTGGATTCGTTGGAAGACTTGATTACCAAAAAGGTATTGACTTGATTCGCCAGGCAATTCCAGAGCTTATGCAAGACGATGTTCAATTTGTAATGCTTGGTTCGGGAAATCCTATATATGAAGACTGGATGAGAGCAACAGAATCACTTTATAAAGATAAATTTCGTGGTTGGGTTGGATTTAATGTTCCGGTATCTCATAGAATAACTGCAGGCTGTGATATACTGTTAATGCCATCAACATTTGAGCCGTGTGGACTAAATCAGTTGTATGCAATGAGATATGGAACTATACCAGTAGTTCATGAAACAGGGGGACTAAGAGATACTGTTCAAAATTTTAATCCATTTGCTGGAGGAAGCGATGCCGAAGGATGCAATGCTGAAGGCACGGGGTGGACGTTTTCTCCACTGACAAAGGAGAGCATGTTAGTGGCTCTAAGATACGCCATTCAAACATATAATGAGCATAAGTCTTCATGGGAGGGGTTGATGAAAAGAGGTATGACGAGAGATTACACCTGGGAAAAGGCCGCCGCTCAATACGAGCAAATCATTGAGTGGGCATTCCTGGATCCACCCTATTGCTGA 1965 0.4331 MESLELPRLFLHHLRASSALAPTRPHSSTNSRFLPQLGFPSKLKNPTLRSISGASQDGPISFEDETQQLRHDDDDDDDDDDKARLLSTEIDHFGSLVAFRLTPHDSGKTAETQGNLRSDEVEKPEIGSAEEEKAQTIVTRNIVFVTSEAAPYSKTGGLADVCGSLPIALAGRGHRVMVISPRYIHGTAADSKFSSAVDLDNTIKVFCFGGAQEVGFYHEYREGVDWVFVDHPSFHRPGNPYGDKHGTFKDNQFRFTLLSHAACEAPLVLPLGGFTYGEKCLFLVNDWHASLVSVLLASKYRPHGVYKDARSILVIHNIAHQGVEPAITYSNLGLPQEWYGALGWVFPTWARTHALDTGEAVNFLKGAIVTADRIVTVSKGYSWEITTTEGGFGLQEILRDRKSILSGITNGIDVTEWDPLSDEHIASNYSADDLSGKVKCKIALQKELGLPVRPDCPVIGFVGRLDYQKGIDLIRQAIPELMQDDVQFVMLGSGNPIYEDWMRATESLYKDKFRGWVGFNVPVSHRITAGCDILLMPSTFEPCGLNQLYAMRYGTIPVVHETGGLRDTVQNFNPFAGGSDAEGCNAEGTGWTFSPLTKESMLVALRYAIQTYNEHKSSWEGLMKRGMTRDYTWEKAAAQYEQIIEWAFLDPPYC 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06550 654 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 118 653 - -
Mepo3g06550 654 MobiDBLite consensus disorder prediction 104 132 - -
Mepo3g06550 654 FunFam Starch synthase, chloroplastic/amyloplastic 141 429 - -
Mepo3g06550 654 Pfam Glycosyl transferases group 1 456 611 IPR001296 GO:0016757
Mepo3g06550 654 Pfam Starch synthase catalytic domain 141 399 IPR013534 -
Mepo3g06550 654 NCBIfam glycogen/starch synthase, ADP-glucose type 141 644 IPR011835 GO:0004373
Mepo3g06550 654 CDD GT5_Glycogen_synthase_DULL1-like 141 646 - -
Mepo3g06550 654 Hamap Glycogen synthase [glgA]. 140 647 IPR011835 GO:0004373
Mepo3g06550 654 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 134 646 - -
Mepo3g06550 654 MobiDBLite consensus disorder prediction 115 130 - -
Mepo3g06550 654 Gene3D Glycogen Phosphorylase B; 160 643 - -
Mepo3g06550 654 Gene3D Glycogen Phosphorylase B; 414 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06550 Mepo-Chr3 79465733 79473630 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06550 108 644 Glycosyltransferase AT3G01180 47.532 4.40e-165 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06550 K00703 - gmx:100807354 1020.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06550 3 79465733 79473630 Mepo3g06550 3 79465733 79473630 ECH