Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06475 ATGCATGTTGCACATCTTTTGTTTGGCATATTTGGGAATGCTTCTGCTTTGTTCCTCTTCTTGGCACCTGTGATTACATTCAAGAGGATTATAGTCAACAAATCTACAGAGAAATTTTCAGGCATACCATATGTTATGACACTGCTCAATTGTCTCCTTTCTGCTTGGTACGGTCTGCCTTTTGTGTCTCCCAACAACATACCGGTAACAACAGTAAATGGCACCGGAGCAGGGATTGAAATCATATATGTTTTGATATTCATCATATTTGCACCTAAGAAGGAAAAGATCAAAATCTTTGCCCTATTCACCTTGGTACTCTCTGTGTTCTCTGCTGTTGTTTTTGTCTCCCTCTTTGCCTTACATGGCAATCTTAGGAAGGTCTTCTGCGGCTTTGCCATGGCTATATTTTCCGTCATCATGTATGGTTCTCCACTCTCAATTATGAGATTAGTGATTAAAACCAAGAGTGTGGAGTTCATGCCATTCTTCTTGTCGCTGTTTGTGTTTCTTTGCGGCACTTCATGGTTTATATTCGGTCTGCTAGGCCGTGACCTATTTGTTGCTGTACCTAATGGTCTTGGTTCTGTTTTGGGGACAATGCAACTAATATTGTATTTCATATACCGTGACAACAAAGGTACTCCAAAACAGCAGGCATCAATAGAAGAGGAATCAATGGAGATGGGTACCGGAAAAAACCATCAAATGAAACAATCTAATGGAAATGAAATTCAAGGATGA 744 0.4005 MHVAHLLFGIFGNASALFLFLAPVITFKRIIVNKSTEKFSGIPYVMTLLNCLLSAWYGLPFVSPNNIPVTTVNGTGAGIEIIYVLIFIIFAPKKEKIKIFALFTLVLSVFSAVVFVSLFALHGNLRKVFCGFAMAIFSVIMYGSPLSIMRLVIKTKSVEFMPFFLSLFVFLCGTSWFIFGLLGRDLFVAVPNGLGSVLGTMQLILYFIYRDNKGTPKQQASIEEESMEMGTGKNHQMKQSNGNEIQG 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06475 247 MobiDBLite consensus disorder prediction 232 247 - -
Mepo3g06475 247 Gene3D - 127 221 - -
Mepo3g06475 247 FunFam Bidirectional sugar transporter SWEET 126 219 - -
Mepo3g06475 247 Pfam Sugar efflux transporter for intercellular exchange 7 94 IPR004316 GO:0016020
Mepo3g06475 247 Pfam Sugar efflux transporter for intercellular exchange 130 213 IPR004316 GO:0016020
Mepo3g06475 247 MobiDBLite consensus disorder prediction 219 247 - -
Mepo3g06475 247 PANTHER RAG1-ACTIVATING PROTEIN 1 16 223 IPR047664 -
Mepo3g06475 247 FunFam Bidirectional sugar transporter SWEET 7 97 - -
Mepo3g06475 247 Gene3D - 9 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06475 Mepo-Chr3 78702195 78704588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06475 1 190 Miscellaneous Gene Families AT1G21460 76.316 5.92e-104 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06475 K15382 - gmx:100800304 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06475 3 78702195 78704588 Mepo3g06475 3 78702195 78704588 ECH
Mepo4g00977 4 12973428 12975975 Mepo3g06475 3 78702195 78704588 PCT