Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06472 ATGGCTTTGGAGAATTGTTTAAGAGTATCCACAGCCAGACCTCAGTGTCTTCCTCCATTGTTTCCAACTTCAAGGGAAAAGGTTGTGTTCTCAGCTCAAAGAGCAGGATTCAAGAAATCTGTGCTGAACTCAACACTATCATTCCCATCTGGTGTTGCCTACAGAAAATCTCGTTTTATTTGCAATGCTCGTGAAGCTGTAAATGAAGTTGGAGCAGTGACTGACTCAAGCTGGAATGAGCTTGTTCTTGCAAGTGAAACCCCTGTGCTGGTAGATTTTTGGGCACCATGGTGTGGTCCATGCAGGATGATAGCACCTATTATTGATGAGCTAGCCAAAGAATATGCTGGAAAAATTTCATGCTACAAGCTCAACACAGATGAGAATCCAAACATAGCAACAAAGTACGGCATCAGAAGCATACCAACTGTTCTATTTTTCAAGAATGGAGAGAAAAAAGAAAGTGTAATTGGTGCAGTTCCAAAGTCTACTCTGTCTACAACTTTGGAAAAATATATTGATGCATGA 528 0.4091 MALENCLRVSTARPQCLPPLFPTSREKVVFSAQRAGFKKSVLNSTLSFPSGVAYRKSRFICNAREAVNEVGAVTDSSWNELVLASETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKISCYKLNTDENPNIATKYGIRSIPTVLFFKNGEKKESVIGAVPKSTLSTTLEKYIDA 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06472 175 PRINTS Thioredoxin family signature 89 97 - -
Mepo3g06472 175 PRINTS Thioredoxin family signature 97 106 - -
Mepo3g06472 175 PRINTS Thioredoxin family signature 137 148 - -
Mepo3g06472 175 FunFam Thioredoxin 64 173 - -
Mepo3g06472 175 ProSitePatterns Thioredoxin family active site. 90 108 IPR017937 -
Mepo3g06472 175 Gene3D Glutaredoxin 70 174 - -
Mepo3g06472 175 PANTHER GEO12009P1 66 174 - -
Mepo3g06472 175 ProSiteProfiles Thioredoxin domain profile. 61 175 IPR013766 -
Mepo3g06472 175 Pfam Thioredoxin 71 170 IPR013766 -
Mepo3g06472 175 CDD TRX_family 76 170 - -
Mepo3g06472 175 NCBIfam thioredoxin 74 172 IPR005746 GO:0015035
Mepo3g06472 175 SUPERFAMILY Thioredoxin-like 58 174 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06472 Mepo-Chr3 78678466 78680121 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06472 K03671 - gmx:100305596 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06472 3 78678466 78680121 Mepo3g06472 3 78678466 78680121 ECH