Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06468 ATGTCTGAGGGAAGAGGCAGTGCAGCTATGAACATGGTCACTGTGATTTCACTGCTGTGCCTTTTGTTTCTGGCTAAAAGTACTAATGCAGAAACTTACACCGTTGGAGGACCTAAGGGATGGACCTTCGGCATTAAGAAGTGGCCTAATGGAAAATCCTTTGTTGCTGGCGATGTGCTCGAATTTGGGTATAATCCAAAGATGCACAATGTGGTTTTGGTGGACCAAACCGGCTACGACAAATGCAAGACACCGGAAGGTTCTCAAGTGTTCAGAACAGGGAGTGACCAAATCGAGCTAGTAAAGGGAGACAACTACTTCATATGCAACATTCCTGGGCATTGTCAATCTGGGATGAAGATTTACGTCAATGCAGCTTAG 381 0.4541 MSEGRGSAAMNMVTVISLLCLLFLAKSTNAETYTVGGPKGWTFGIKKWPNGKSFVAGDVLEFGYNPKMHNVVLVDQTGYDKCKTPEGSQVFRTGSDQIELVKGDNYFICNIPGHCQSGMKIYVNAA 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06468 126 Gene3D - 31 125 IPR008972 -
Mepo3g06468 126 CDD Plantacyanin 32 125 IPR041844 -
Mepo3g06468 126 ProSitePatterns Type-1 copper (blue) proteins signature. 103 119 IPR028871 -
Mepo3g06468 126 Pfam Plastocyanin-like domain 41 119 IPR003245 GO:0009055
Mepo3g06468 126 ProSiteProfiles Phytocyanin domain profile. 31 126 IPR003245 GO:0009055
Mepo3g06468 126 SUPERFAMILY Cupredoxins 32 125 IPR008972 -
Mepo3g06468 126 PANTHER BLUE COPPER PROTEIN 25 124 IPR039391 GO:0009055
Mepo3g06468 126 FunFam basic blue protein-like 31 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06468 Mepo-Chr3 78629493 78630494 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06468 10 121 Miscellaneous Gene Families AT5G26330 36.752 6.38e-24 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06468 - - gmx:100788635 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06468 3 78629493 78630494 Mepo3g06468 3 78629493 78630494 ECH