Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06465 ATGGTTGGGAAGGATAATTTGAAGACTGAGGATTTGAATTTGTTTTTTGAGAATCTTATGATGGTTGCTGGTGGTGGTGAGAAAGGAGGGAACATGAAGGTTGGTGTGATCACTGAATGGAAGGATATTCCTGTTGAGCTTTTGATGCAGATTCTGTCTCTTGTGGATGATCAGACGGTGATTCGGGCTTCTGGTGTTTGTCGTGGTTGGAGAGATTCTATTTACTTTGGTCTTGCTCGTTTATCACTTTCATGGTGTAACAAGAACATGAACAACTTGGTCCTATCTCTTGTTCCCAAGTTTGCAAAACTGCAAACTCTAATCCTTCGTCAAGATAAGCCACAACTGGATGACAATGTTGTTGGCACTATTGCAAATTTCTGTCATGACCTGCAGATTCTTGACCTCAGCAAAAGTTTCAAGCTCACTGATCGTTCACTGTATGCTATTGCTCATGGTTGCCGCGATCTTACAAAACTAAACATCAGTGGATGTTCAGCATTTAGTGACAATGCTCTGGCCTACCTTGCTGGTTTCTGTAGAAAACTGAAAGTTCTAAATCTCTGTGGATGTGTTAGAGCAGCTTCTGATACTGCACTTCAGGCTATTGGACACTACTGCAATCAGTTGCAGTCTTTGAACCTTGGATGGTGTGACAAAGTTGGTGATGTTGGAGTGATGAGTCTAGCATATGGTTGTCCTGATCTAAGAACAGTTGATTTGTGTGGCTGTGTCTATATAACAGATGATAGTGTGATTGCTTTGGCAAACGGATGCCCTCACCTAAGGTCCCTTGGACTGTACTTCTGCAAGAACATAACAGACAATGCAATGTATTCATTGGCACAAAGCAAAGTGAAGAACAGGATGTGGGGATCTGTGAAAGGAGGAAATGATGAAGATGGACTAAGGACATTGAACATCAGTCAGTGCACTTCACTCACTCCTTCAGCTGTTCAGGCGGTTTGTGACTCATCTCCTGCTCTCCACACATGCTCAGGGAGGCATTCACTCATCATGAGTGGCTGTCTCAATTTGACCGAAGTCCATTGTGCTTGTGCTGGTCACGCACACCGTGCAATGAACGCTTTCCCTCATCCTGCTCATTAA 1110 0.4351 MVGKDNLKTEDLNLFFENLMMVAGGGEKGGNMKVGVITEWKDIPVELLMQILSLVDDQTVIRASGVCRGWRDSIYFGLARLSLSWCNKNMNNLVLSLVPKFAKLQTLILRQDKPQLDDNVVGTIANFCHDLQILDLSKSFKLTDRSLYAIAHGCRDLTKLNISGCSAFSDNALAYLAGFCRKLKVLNLCGCVRAASDTALQAIGHYCNQLQSLNLGWCDKVGDVGVMSLAYGCPDLRTVDLCGCVYITDDSVIALANGCPHLRSLGLYFCKNITDNAMYSLAQSKVKNRMWGSVKGGNDEDGLRTLNISQCTSLTPSAVQAVCDSSPALHTCSGRHSLIMSGCLNLTEVHCACAGHAHRAMNAFPHPAH 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06465 369 Pfam F-box-like 41 74 IPR001810 GO:0005515
Mepo3g06465 369 SMART LRR_CC_2 128 153 IPR006553 -
Mepo3g06465 369 SMART LRR_CC_2 154 179 IPR006553 -
Mepo3g06465 369 SMART LRR_CC_2 259 284 IPR006553 -
Mepo3g06465 369 SMART LRR_CC_2 207 232 IPR006553 -
Mepo3g06465 369 SMART LRR_CC_2 300 325 IPR006553 -
Mepo3g06465 369 SMART LRR_CC_2 233 258 IPR006553 -
Mepo3g06465 369 SMART LRR_CC_2 180 206 IPR006553 -
Mepo3g06465 369 Pfam Leucine Rich repeat 233 256 IPR001611 GO:0005515
Mepo3g06465 369 Pfam Leucine Rich repeat 207 230 IPR001611 GO:0005515
Mepo3g06465 369 Pfam Leucine Rich repeat 259 282 IPR001611 GO:0005515
Mepo3g06465 369 SUPERFAMILY F-box domain 38 74 IPR036047 GO:0005515
Mepo3g06465 369 Gene3D Ribonuclease Inhibitor 80 295 IPR032675 -
Mepo3g06465 369 CDD F-box_AtSKP2-like 39 86 - -
Mepo3g06465 369 Gene3D - 37 79 - -
Mepo3g06465 369 FunFam F-box protein SKP2B 75 293 - -
Mepo3g06465 369 SUPERFAMILY RNI-like 77 283 - -
Mepo3g06465 369 PANTHER UNCHARACTERIZED 231 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06465 Mepo-Chr3 78604504 78608260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06465 K03875 - gmx:100818928 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06465 3 78604504 78608260 Mepo3g06465 3 78604504 78608260 ECH