Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06459 ATGGCATCTTTGTTATTGAGAAGGTCTAGGACCTTAGTTCCTAATCACCAGCACCTTCAAAGTAAGCTGGCTAGCTTGTTACTAGGATCAGGATCAACAACATTCATCAACCACCACTCTTCTTCTCACATCTTTCGATCTTCTTCTCACCCATTTGTTGCATCATCACGTTATGAATCCACCAAAGCCCAGGCACAGTTGGATTTGCAGCATGTCACCCACGATGACCATGATGATCAGTTCATCGATTTTCCTGGAGGGAAAGTTGGATTCACTTCTGAAATGAGATTCATTTCTGATACTTCTCACAAAAGAGTTCCTTGCTATCGAGTCCTTGATGAAGACGGTGAGCCCATGAAACACACCAATTATGTTCAGGTTAGCAGAGAAATGGCTGTGAGGATGTATTCTGAGATGGTCACTCTTCAAACTATGGACAGCATATTCTATGAGGTACAGAGGCAAGGAAGAATTTCCTTCTACCTCACCTCAATGGGAGAAGAAGCAGTTAACATTGCATCAGCAGCTGCACTTTCTTCTGATGATATTATCTTGCCACAGTACCGTGAGCCTGGAGTTCTGCTATGGCGCGGTTTCACTCTGCAACAATTTGCTCATCAATTATTTGGAAACACAAATGATTTTGGTAAAGGAAGACAAATGCCTATACACTACGGCTCTAACAACCACAATTACTTCACAGTCTCATCCCCTATTGCAACACAACTTCCTCAAGCTGTAGGCGCTGCTTATTCGCTTAAAATGGACGGAAAAAGTGCTTGTGCAGTAACTTTTTGTGGGGATGGAGGTACTAGTGAGGGAGATTTCCACGCTGGTATGAATTTTGCAGCAGTAATGGAGGCACCGGTTATTTTTATCTGTCGTAACAATGGATGGGCCATCAGCACCCCTGTCGAAGAACAATTTCGAAGTGATGGTATTGTGGTGAAAGGTCAAGCTTATGGAATATGGAGTATCCGAGTAGATGGAAATGACGCACTTGCTGTTTATAGTGCAGTTCATACTGCACGTGAAATTGCTATAAAAGAACAAAGACCAGTCTTAATCGAGGCTCTTAGTTATAGAGTAGGACACCACTCTACATCCGACGATTCAACCAAGTACAGACCAATTGACGAGATTGAATATTGGAAGATGGAAAGAAATCCTGTGAATAGATTCAAAAAATGGGTTGAAAGGAATGGTTGGTGGAGTGACAAGGATGAATTGGAGCTTAGAAGCAGTGTAAGGAAGCAGTTAATGCATGCTATTCAAGTAGCAGAGAAAGCACAAAAACCTCCACTTGAGGACATGTTTACTGATGTCTATGACAAACTTTCATCAAACCTTGAGGAGCAAGAAAGAGAACTTAGAAAAATCATTGAGAAGCATCCCAAAGATTACCCTTCTGATGTACCTTTGTAG 1425 0.4196 MASLLLRRSRTLVPNHQHLQSKLASLLLGSGSTTFINHHSSSHIFRSSSHPFVASSRYESTKAQAQLDLQHVTHDDHDDQFIDFPGGKVGFTSEMRFISDTSHKRVPCYRVLDEDGEPMKHTNYVQVSREMAVRMYSEMVTLQTMDSIFYEVQRQGRISFYLTSMGEEAVNIASAAALSSDDIILPQYREPGVLLWRGFTLQQFAHQLFGNTNDFGKGRQMPIHYGSNNHNYFTVSSPIATQLPQAVGAAYSLKMDGKSACAVTFCGDGGTSEGDFHAGMNFAAVMEAPVIFICRNNGWAISTPVEEQFRSDGIVVKGQAYGIWSIRVDGNDALAVYSAVHTAREIAIKEQRPVLIEALSYRVGHHSTSDDSTKYRPIDEIEYWKMERNPVNRFKKWVERNGWWSDKDELELRSSVRKQLMHAIQVAEKAQKPPLEDMFTDVYDKLSSNLEEQERELRKIIEKHPKDYPSDVPL 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06459 474 Coils Coil 443 463 - -
Mepo3g06459 474 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 106 469 IPR029061 -
Mepo3g06459 474 CDD TPP_E1_PDC_ADC_BCADC 135 427 - -
Mepo3g06459 474 Gene3D - 77 472 - -
Mepo3g06459 474 FunFam 2-oxoisovalerate dehydrogenase subunit alpha 77 473 - -
Mepo3g06459 474 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 73 472 - -
Mepo3g06459 474 Pfam Dehydrogenase E1 component 138 434 IPR001017 GO:0016624
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06459 Mepo-Chr3 78566254 78571930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06459 8 311 Acyl Lipid Metabolism Gene Families AT1G21400 63.816 4.22e-141 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06459 K00166 - gmx:100796766 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06459 3 78566254 78571930 Mepo3g06459 3 78566254 78571930 ECH