Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06451 ATGGCTAATAATGCTGCTGCGTGTGCTGAGAGAGCAACCAGTGATTTGCTCATCGGTCCTGATTGGGCTATCAATATTGAATTGTGTGATATCATCAATATGGACCCTAGGCAAGCAAAGGATGCATTGAAGATAATTAAGAAGCGCTTGGGCAGTAAAAATCCCAAAACACAGCTGCTGGCTCTTTTTGTACTGGAGACCCTTACTAAAAATTGCGGTGAAAGTGTATTTCAGCAGATCATTGAGCGTGATATATTACACGAAATGGTTAAGATAGTGAAGAAGCGGCCGGACTTAAGTGTGAGGGAAAAGATACTGATTTTAATTGATGCATGGCAAGAAGCTTTTGGAGGCCCAAGCGGAGCTTTCCCCCAATACTATGCAGCATATAATGAACTAAAGGCCGCTGGAGTTGAATTTCCACCAAGAGAAGAAAATAGCGTGCCATTCTTCACACCTCCTCAAACTCAGCCGATTGTTAATTCTGCTGCAGAATTTGATGATGCTGCTATTCAGGCTTCCCTTCAGTCAGATGCATCTGACCTTAGTGTACTAGAGATTAAAAATGCTCAAGGGCTGGCTGATGTTTTGACGGAAATGCTCAGTGCTTTGAATCCGAAAGACCCCGAGGGCGTGAAGGAGGAAGTGATTGTTGATCTTGTTGACCAGTGCCGTTCTTACCAGAAACGTGTCATGCTTCTTGTGAATAGTACTGCGGATGAGGAGCTTTTAGGTCTGGGATTGGCACTGAATGACAGCCTTCAGCGAGTACTCCTTCAACATGACAATATTGCGAAAGGAACTGCTAATTCAGGTGCAAGAGGAGTAGAAACTCCAGTTCTGCCACTTGTACATGTAAACCATGAAGATGATGAGTCAGAAGATGATTTTGGTCAATTAGCCCATAGGTCTTCACGAGATACTCATACACAGAATCGGAAACCAGAGTCAGTGAGGATGAACTCGCTTATTCCCCCACCACCAGCATCAAGGAAGCCAGTCTACTCTGGTACTAGCATGGTTGACTATCTTAGTGGTGATGCATACAAGGCAGAAGGATCCCTTGAAAACTCAGAACCAACTTCATTTGCAGCTCCTCTTCATTCTAGCCCTAATCCTACCTCATCCGCTATTCCTACAGAGTCTTCAACCCATCCTCATGCCACTACTACCTCATCACCAATTTATAGCAGACAGCCTATATATGATGAACCATCTCCCATGAAGACTTCAGAACCGCTGCCTCCAGCTCCCTGGGATACACAAGCTCCTGTCGTGATTCCACCCCCACCTTCAAAGTATAATCAGAGACAACAGTTTTTCGAGCAACAAGGTTCATCTCATTCAAGTAATGGATCAAGTTCGTCTACTGACAGCTTGCTGGGACAAACTCAAAATCTCTCTCTGAATTCATCCACCCCAACCAAAGAACAGAAGCCAGAAGACGCCCTTTTCAAAGATCTAGTTGATTTTGCAAAATCGAAAACCTCTTCATCTTCCAAACCCAATAATAGGTCGTATTGA 1524 0.4416 MANNAAACAERATSDLLIGPDWAINIELCDIINMDPRQAKDALKIIKKRLGSKNPKTQLLALFVLETLTKNCGESVFQQIIERDILHEMVKIVKKRPDLSVREKILILIDAWQEAFGGPSGAFPQYYAAYNELKAAGVEFPPREENSVPFFTPPQTQPIVNSAAEFDDAAIQASLQSDASDLSVLEIKNAQGLADVLTEMLSALNPKDPEGVKEEVIVDLVDQCRSYQKRVMLLVNSTADEELLGLGLALNDSLQRVLLQHDNIAKGTANSGARGVETPVLPLVHVNHEDDESEDDFGQLAHRSSRDTHTQNRKPESVRMNSLIPPPPASRKPVYSGTSMVDYLSGDAYKAEGSLENSEPTSFAAPLHSSPNPTSSAIPTESSTHPHATTTSSPIYSRQPIYDEPSPMKTSEPLPPAPWDTQAPVVIPPPPSKYNQRQQFFEQQGSSHSSNGSSSSTDSLLGQTQNLSLNSSTPTKEQKPEDALFKDLVDFAKSKTSSSSKPNNRSY 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06451 507 MobiDBLite consensus disorder prediction 290 336 - -
Mepo3g06451 507 MobiDBLite consensus disorder prediction 290 314 - -
Mepo3g06451 507 MobiDBLite consensus disorder prediction 352 484 - -
Mepo3g06451 507 SUPERFAMILY ENTH/VHS domain 8 142 IPR008942 -
Mepo3g06451 507 Pfam VHS domain 9 133 IPR002014 GO:0035091|GO:0043130
Mepo3g06451 507 MobiDBLite consensus disorder prediction 432 478 - -
Mepo3g06451 507 Gene3D - 2 158 IPR008942 -
Mepo3g06451 507 MobiDBLite consensus disorder prediction 409 431 - -
Mepo3g06451 507 FunFam TOM1-like protein 2 4 151 - -
Mepo3g06451 507 Gene3D - 175 273 IPR038425 -
Mepo3g06451 507 CDD VHS 10 135 - -
Mepo3g06451 507 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Mepo3g06451 507 PIRSF TOM1 1 507 IPR014645 -
Mepo3g06451 507 SUPERFAMILY GAT-like domain 144 267 - -
Mepo3g06451 507 Pfam GAT domain 193 267 IPR004152 GO:0035091|GO:0043130
Mepo3g06451 507 PANTHER TOM1-LIKE PROTEIN 1 502 IPR044836 GO:0035091|GO:0043130|GO:0043328
Mepo3g06451 507 ProSiteProfiles GAT domain profile. 177 266 IPR004152 GO:0035091|GO:0043130
Mepo3g06451 507 MobiDBLite consensus disorder prediction 355 399 - -
Mepo3g06451 507 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06451 Mepo-Chr3 78522261 78528660 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06451 - - gmx:100792343 796.193