Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06435 ATGGCATACTTAGAGGGAATAAGAGAGTCCCAAAGAGCTCGTGGTCCAGCCACCATACTAGCCATTGGTACTGCAACTCCAGTCAATTGCATTTACCAATCTGATTTCACTGATTATTACTTCCGAGTTACCAAAAGCGAACACATGACTCAACTCAAGGCCAAATTGAAGCGTATATGTGAGAAATCAATGATAAAGAAACGTTACATACACCTAACTGAAGAAATCCTAAAAGAACACCCCAATATATCCACTTATGAAGAACCATCCCTCAACGTACGCCAAGACATATTAGTTGAAGAAGTGCCAAAGCTAGGCGAAAAAGCAGCATTAAAAGCCCTAAAAGAATGGGGAAGACCAAAGTCAGAGATTACCCATCTCATATTTTGTTCAACTTCTGGTGTTGACATGCCTGGTGCTGATTATCAACTCATCAAACTCTTGAATCTAAATCCATCGACAAAAAGGTTCATGTTGTACCACCAAGGTTGTTATGCTGGTGGAACCGTTCTTCGTCTTGCCAAAGATCTCGCTGAGAATAATGTTGGTGCACGTGTCCTCGTTGTGTGTTCTGAAATAACTGTTGTTACTTTTCGTGGGCCCAATGAAACACACTTGGATTCTTTAGTTGGACAAGCACTTTTTGGTGACGGTGCTTCATCTGTGATCGTTGGATCAAATCCTGATACAACACTTGAACGTCCGTTATTTCATCTTGTTTCGGCTTCAGAAACGATTCTACCAAACTCTGAAGGTGCTATTGAAGGACACTTGCGTGAAGTGGGACTCACTTTTCATTTGAAAGATAATGTTCCAAGTTTGATTGGTGAGAATATTGAGAAGAGTTTAGAAGAGACTTTTCATCCGTTGGGAATTACTGATTGGAATTCTTTGTTTTGGGTAACCCACCCTGGTGGTCCTGCAATAATTAAGAGGATTGAAGAAGTGGTTGGGTTGAATTCAGATAAACTAAATGCAACTAAACATGTTTTGAGTGAGTATGGAAACATGTCAAGTGCTTGTGTATTATTTATATTAGATGAGATGAGAAGAAGGTCTATGGAAGAGGGGAAAACAACAACTGGTGAAGGACTTAAATGGGGTGTTTTGTTTGGATTTGGACCTGGCTTGACCATGGAAACCATTGCTTTGCATAGCGCCAACATAGACCATGGTTACTAG 1182 0.4044 MAYLEGIRESQRARGPATILAIGTATPVNCIYQSDFTDYYFRVTKSEHMTQLKAKLKRICEKSMIKKRYIHLTEEILKEHPNISTYEEPSLNVRQDILVEEVPKLGEKAALKALKEWGRPKSEITHLIFCSTSGVDMPGADYQLIKLLNLNPSTKRFMLYHQGCYAGGTVLRLAKDLAENNVGARVLVVCSEITVVTFRGPNETHLDSLVGQALFGDGASSVIVGSNPDTTLERPLFHLVSASETILPNSEGAIEGHLREVGLTFHLKDNVPSLIGENIEKSLEETFHPLGITDWNSLFWVTHPGGPAIIKRIEEVVGLNSDKLNATKHVLSEYGNMSSACVLFILDEMRRRSMEEGKTTTGEGLKWGVLFGFGPGLTMETIALHSANIDHGY 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06435 393 PIRSF PKS_III 3 389 IPR011141 GO:0009058|GO:0016747
Mepo3g06435 393 ProSitePatterns Chalcone and stilbene synthases active site. 156 172 IPR018088 GO:0009058|GO:0016746
Mepo3g06435 393 Pfam Chalcone and stilbene synthases, N-terminal domain 7 228 IPR001099 -
Mepo3g06435 393 CDD CHS_like 16 384 - -
Mepo3g06435 393 Gene3D - 1 235 IPR016039 GO:0016746
Mepo3g06435 393 Pfam Chalcone and stilbene synthases, C-terminal domain 239 386 IPR012328 -
Mepo3g06435 393 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 6 387 IPR011141 GO:0009058|GO:0016747
Mepo3g06435 393 SUPERFAMILY Thiolase-like 1 232 IPR016039 GO:0016746
Mepo3g06435 393 FunFam Chalcone synthase 2 1 235 - -
Mepo3g06435 393 FunFam Chalcone synthase 1 236 388 - -
Mepo3g06435 393 Gene3D - 236 392 IPR016039 GO:0016746
Mepo3g06435 393 SUPERFAMILY Thiolase-like 235 386 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06435 Mepo-Chr3 78374124 78376159 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06435 K00660 K13232 nnu:104591893 605.134