Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06418 ATGGCCACTCTCTCATACCCATTCTTCACCGTTCAGAGAACCACTTCAACCCACACCAATGCCTTCTTCATTCGACCTTCTCTTTCCTTCACACGCCTCCCACGACGTCGTTTCACACCCGTATTCGCTTCCGTCTCATCCATTAAGGAAAATCTTGGTCGCATTCATAACACTTTCACTGACTTCATTAGCTTGAACCACTGGGTCGTTAGTGACTACTTCCGTCTGGTGGACTCAGTTAATGCCTTTGAACCACGGATTCAGGCGCTATCTGATGAGCAGTTGGCTGCCAAAACTGAGGAGTTTCGTCTCCGGCTCAAGCGAGGGGAGACGTTTGCAGATATTCAAGCAGAGGCGTTCGCTGTTGTTCGTGAGGCTGCCAGAAGAAAACTTGGAATGCGCCATTTTGATGTTCAGATTATCGGTGGAGCTGTGCTGCATGATGGGTCCATTGCCGAGATGAAAACGGGAGAGGGAAAAACCTTAGTTTCCACCCTAGCAGCGTATCTTAATGCCCTGACCTCTGAGGGTGTCCATGTTGTAACTGTCAACGATTATTTAGCTCAACGTGATGCTGAATGGATGGGGCGCGTTCATCGTTTCTTAGGTCTTTCTGTTGGTCTTATTCAGAAAGGGATGAATTCTGAAGAGCGGAGATTCAACTATAGATGTGATATAACATATACCAATAATTCGGAGCTTGGCTTTGACTACTTGAGAGATAATCTTGCTGGAAATAGTGAACAACTTGTGATGAGATGGCCAAAGCCATTTCATTTTGCTATTGTTGATGAGGTGGATTCAGTCCTGATAGATGAGGGAAGAAATCCATTGTTAATCAGTGGTGAGGCTAGTCAAGATGCTGCACGGTACCCAGTTGCTGCAAAAGTAGCCGAATTGCTTATACATGGCATTCATTACAAAGTGGAACTCAAAAATAATTCGGTGGAGTTGACCGAGGAAGGAATTACTCTTGCTGAAATGGCTCTTGAAACAAATGACCTTTGGGATGAAAATGATCCCTGGGCTAGATTTGTGATGAATGCTTTAAAAGCTAAAGAATTCTATCGCCGAGATGTGCAATACATGGTCAGAGATGGAAAGGCTTTAATTATAAATGAGCTGACAGGAAGAGTTGAAGAGAAAAGGAGGTGGTCTGAGGGGATTCACCAAGCGGTGGAGGCAAAGGAATGTTTGAAGATTCAGGCAGATTCTGTTGTTGTGGCACAAATCACATACCAATCATTATTCAAGCTGTATCCAAAATTGTCAGGAATGACTGGAACTGCAAAAACAGAAGAGAAAGAGTTCTTAAAAATGTTCCAGACACCAGTCATTGAAGTGCCAACAAATCTTCCTAATATTCGTAAAGACTTGCCTATTCAAGCATTTGCTACTGCTCGAGGGAAATGGGAGCAAGTTCGCCGAGAAGTTGAAGATATGTTTAGACAAGGGCGTCCTGTCTTGGTTGGGACAACTAGTGTAGAAAATTCTGAACTTTTGGCTGGTCTGCTTAGGGAATGGAATATTCCGCATAATGTTCTGAATGCTCGACCCAAGTATGCTGCGAGAGAAGCCGAAATTGTTGCACAAGCAGGACGAAAACATGCCATTACAATATCTACAAATATGGCAGGCAGGGGCACAGATATAATCCTTGGAGGAAATCCAAAAATGCTTGCCAGAGGAATTATAGAGGACAGTGTAGTTTCCTTTTTGACACGGGAGGACCCAAATAGTGTACTTGCCGGTCAGGCCATTTCCGAAAAGATGCTTCCAAAGATAAAGGTGGGATCATCATCATTAGCCTTATTGGCTAGGACAGCCTTAATGGCAAAATATGTATCGAAAAGTGAGGGTAAAAGTTGGACATATCAGAAGGCTATATCTTTTATCTTGGAGTCTATTGAAATGAGTCTTTCATATAGTTCGCAAGAGCTGGAGAAGCTTGCCAATGAAGAATCTGAGATGTACCCACTTGGTCCAACAGTAGCACTTGCATATCTGTCAGTTTTAAAGGATTGTGAAGAACACTGTTTGCTTGAAGGATCTGAGGTAAAAAGGCTTGGGGGCCTTCATGTGATTGGTACATCTTTACATGAGTCCCGGAGAATAGACAACCAGCTTCGTGGCAGAGCAGGAAGGCAGGGAGATCCGGGGTCAACACGATTTATGGTCAGCTTGCAGGATGAGATGTTTCAAAAATTCAATTTTGATACTGAATGGGCTGTCAGACTTATATCAAAAATTACAAACGACGAGGATCTGCCAATTGAAGGTGGTGCCATTGTGAAACAGCTCTTGGCATTGCAAATCAATGCAGAAAAGTTCTTCTTCGGCATAAGAAAAAACCTTGTTGAGTTTGATGAAGTATTGGAGGTGCAACGAAAACATGTTTATGATCTAAGGCAGTTAATCTTAACAGGAGATGATGAAAGCTGTTCCCAACACATATTACAGTACATGCAAGCAGTGGTGGATGAGATTGTCTTCAGTAACATTGATCCATTGAAGCATCCTCGAAGTTGGGGTTTGAGTAATCTCTTGAAAGAGTTCAAGACAATTGGTGGAAAGCTGTTGCATGAATCATTTGGAGGGATTAATGATGACACTTTACTAAATTCACTTGGGCAACTGAATGAAGTGAAATCAGTCGATGTTGTCAACTTTTGCCTTCCAAATTTGCCAGCACCTCCAAATGCTTTCAGGGGAATTCGCAGGAAGAGCTCTTCATTAAGACGATGGCTTGCTATTTGCACCGATGATTTAATTGAGAATGGAAAGTATCAGACAACTTCTAATCTCCTTCGTAAGTATCTTGGAGATTTTCTGATCGCTTCATATTTAGATGTTGTTGAAGAGTCTGGTTATGACGAGAGCTATGTAAAAGAGATTGAGAGAGCTGTTCTTTTGAAAACTCTTGATTGTTTCTGGAGAGATCATCTTGTAAACATGAATCGGCTCAGCTCTGCGGTGAATGTTAGGAGCTTCGGCCACAGAAATCCTCTGGAAGAATACAAAATTGATGGTTGTCGGTTTTTCATCTCAATGCTCAGTGCAACTCGAAGGTTAACTGTAGAAGCACTCTTACGGCATTGGACGTCTCCAATGGAATCCCAAGAATTATTTTTATAA 3135 0.4249 MATLSYPFFTVQRTTSTHTNAFFIRPSLSFTRLPRRRFTPVFASVSSIKENLGRIHNTFTDFISLNHWVVSDYFRLVDSVNAFEPRIQALSDEQLAAKTEEFRLRLKRGETFADIQAEAFAVVREAARRKLGMRHFDVQIIGGAVLHDGSIAEMKTGEGKTLVSTLAAYLNALTSEGVHVVTVNDYLAQRDAEWMGRVHRFLGLSVGLIQKGMNSEERRFNYRCDITYTNNSELGFDYLRDNLAGNSEQLVMRWPKPFHFAIVDEVDSVLIDEGRNPLLISGEASQDAARYPVAAKVAELLIHGIHYKVELKNNSVELTEEGITLAEMALETNDLWDENDPWARFVMNALKAKEFYRRDVQYMVRDGKALIINELTGRVEEKRRWSEGIHQAVEAKECLKIQADSVVVAQITYQSLFKLYPKLSGMTGTAKTEEKEFLKMFQTPVIEVPTNLPNIRKDLPIQAFATARGKWEQVRREVEDMFRQGRPVLVGTTSVENSELLAGLLREWNIPHNVLNARPKYAAREAEIVAQAGRKHAITISTNMAGRGTDIILGGNPKMLARGIIEDSVVSFLTREDPNSVLAGQAISEKMLPKIKVGSSSLALLARTALMAKYVSKSEGKSWTYQKAISFILESIEMSLSYSSQELEKLANEESEMYPLGPTVALAYLSVLKDCEEHCLLEGSEVKRLGGLHVIGTSLHESRRIDNQLRGRAGRQGDPGSTRFMVSLQDEMFQKFNFDTEWAVRLISKITNDEDLPIEGGAIVKQLLALQINAEKFFFGIRKNLVEFDEVLEVQRKHVYDLRQLILTGDDESCSQHILQYMQAVVDEIVFSNIDPLKHPRSWGLSNLLKEFKTIGGKLLHESFGGINDDTLLNSLGQLNEVKSVDVVNFCLPNLPAPPNAFRGIRRKSSSLRRWLAICTDDLIENGKYQTTSNLLRKYLGDFLIASYLDVVEESGYDESYVKEIERAVLLKTLDCFWRDHLVNMNRLSSAVNVRSFGHRNPLEEYKIDGCRFFISMLSATRRLTVEALLRHWTSPMESQELFL 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06418 1044 Gene3D Helical scaffold and wing domains of SecA 762 874 - -
Mepo3g06418 1044 Pfam SecA DEAD-like domain 68 437 IPR011115 GO:0005524|GO:0016020|GO:0017038
Mepo3g06418 1044 Pfam SecA preprotein cross-linking domain 290 394 IPR011130 GO:0016020|GO:0017038
Mepo3g06418 1044 SUPERFAMILY Helical scaffold and wing domains of SecA 763 1032 IPR036266 -
Mepo3g06418 1044 SMART SecA_DEAD_2 59 438 IPR011115 GO:0005524|GO:0016020|GO:0017038
Mepo3g06418 1044 Hamap Protein translocase subunit SecA [secA]. 57 1035 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mepo3g06418 1044 NCBIfam preprotein translocase subunit SecA 80 854 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mepo3g06418 1044 Pfam SecA Wing and Scaffold domain 757 1031 IPR011116 GO:0016020|GO:0017038
Mepo3g06418 1044 Gene3D - 75 451 IPR027417 -
Mepo3g06418 1044 PRINTS SecA protein signature 153 167 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mepo3g06418 1044 PRINTS SecA protein signature 222 242 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mepo3g06418 1044 PRINTS SecA protein signature 412 429 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mepo3g06418 1044 PRINTS SecA protein signature 375 397 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mepo3g06418 1044 PRINTS SecA protein signature 169 179 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mepo3g06418 1044 PRINTS SecA protein signature 449 462 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mepo3g06418 1044 PRINTS SecA protein signature 115 139 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mepo3g06418 1044 CDD DEXDc_SecA 94 450 - -
Mepo3g06418 1044 ProSitePatterns SecA family signature. 538 553 IPR020937 GO:0006605|GO:0006886|GO:0016020
Mepo3g06418 1044 ProSiteProfiles SecA family profile. 55 759 IPR014018 -
Mepo3g06418 1044 FunFam Preprotein translocase SecA subunit 284 404 - -
Mepo3g06418 1044 SUPERFAMILY Pre-protein crosslinking domain of SecA 282 403 IPR036670 GO:0016020|GO:0017038
Mepo3g06418 1044 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 451 IPR027417 -
Mepo3g06418 1044 Gene3D - 284 404 - -
Mepo3g06418 1044 PANTHER SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM 46 1042 IPR000185 GO:0005524|GO:0006605|GO:0006886
Mepo3g06418 1044 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 141 304 IPR014001 -
Mepo3g06418 1044 SMART SecA_PP_bind_2 283 394 IPR011130 GO:0016020|GO:0017038
Mepo3g06418 1044 FunFam Protein translocase subunit SecA 903 1032 - -
Mepo3g06418 1044 Gene3D - 453 759 IPR027417 -
Mepo3g06418 1044 FunFam Protein translocase subunit SecA 762 881 - -
Mepo3g06418 1044 FunFam Protein translocase subunit SecA 73 293 - -
Mepo3g06418 1044 Gene3D Helical scaffold and wing domains of SecA 900 1035 - -
Mepo3g06418 1044 CDD SF2_C_secA 456 727 IPR044722 -
Mepo3g06418 1044 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 453 740 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06418 Mepo-Chr3 78180421 78205281 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06418 K03070 - gmx:100793437 1807.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06418 3 78180421 78205281 Mepo3g06418 3 78180421 78205281 ECH