Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06406 ATGAGCTTCTTGAGGCCATCTGCGATGTACAATTTTTTGATTACTTATCCTTCATCACGATGGATGCCATGTCAGAGTTGGGGGTTCCTTCGATGGCCCGGTCTTGAAGGTTTCTTAAGACTTCTTGTGGTTTTTCTTCTTTGGTCTACCTTCTCCCATCTCTGCTATATTCCTTCTTCTTCTATGTACCCTACCCTTCGTGTTGGCGATCGAATCATTGTCGAAAAGGCTTCATATTATATCAGGAGTCCTTCTATACATGATATTGTAACATTTCGGGATCCAACGCAGCACTCTGGAGATAACACAGCTGTAATTTTTATTAAGAGAGTTGTTGCAAAAGAAGGAGACACTGTTGAGGTTCATCATGGAGGGCTCTATGTCAATGGTGTTGTTCAAGAGGAGGATTTCGTGGTAGAGAAACCAACATACACAACGAAATTAACCGTGAGACCAATGTTATTAATTCTGATCAATTCTATCCTTATCTGTTTATTCAACATTTGGGATTTTTCCTTTCCTCATTACTTCTATGATCCTTGCAGCATGTGCCGAAAGGCCATGTTTATGTGTTGGGGGATAATCGCAACAATAGCTATGATTCCCATATATGGGGACCACTTCCTATGA 630 0.4079 MSFLRPSAMYNFLITYPSSRWMPCQSWGFLRWPGLEGFLRLLVVFLLWSTFSHLCYIPSSSMYPTLRVGDRIIVEKASYYIRSPSIHDIVTFRDPTQHSGDNTAVIFIKRVVAKEGDTVEVHHGGLYVNGVVQEEDFVVEKPTYTTKLTVRPMLLILINSILICLFNIWDFSFPHYFYDPCSMCRKAMFMCWGIIATIAMIPIYGDHFL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06406 209 Pfam Signal peptidase, peptidase S26 38 143 IPR019533 GO:0004252|GO:0006465
Mepo3g06406 209 ProSitePatterns Signal peptidases I serine active site. 59 66 IPR019756 GO:0004252|GO:0016020
Mepo3g06406 209 PRINTS Bacterial leader peptidase 1 (S26A) family signature 107 119 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo3g06406 209 PRINTS Bacterial leader peptidase 1 (S26A) family signature 50 66 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo3g06406 209 PANTHER SIGNAL PEPTIDASE I 36 149 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo3g06406 209 CDD S26_SPase_I 56 113 IPR019533 GO:0004252|GO:0006465
Mepo3g06406 209 NCBIfam signal peptidase I 40 143 IPR000223 GO:0006508|GO:0008236|GO:0016020
Mepo3g06406 209 SUPERFAMILY LexA/Signal peptidase 51 152 IPR036286 -
Mepo3g06406 209 Gene3D Umud Fragment, subunit A 59 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06406 Mepo-Chr3 78092318 78097185 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06406 K03100 - gmx:100306121 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06406 3 78092318 78097185 Mepo3g06406 3 78092318 78097185 ECH