Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06396 ATGCCAGCTTCTCCTTCAGATAACCGAGCCAAATGGAGGAAACGGAAGAGAGAATCACGAATCAACCAGCGTCAACAGAAGCTTCAAGAGGAAGAAGAAGAAGACGACGAAGAAAATCCCAATGCCGACGAAGACCACGACCGCGACTACGATTCCGACGACCAACACCACCCTAATTCTCAACCTCAACAAGAAATTGAAGTTCTCTCTGATCATGCTGTTCAGATTTCGCAGTTTCCAATGGTAATTAAGCGTGCTGTCAATCGTCCACACTCTTCTGTAACCGCAATTGTGGCTCTTGAACGAGCTATGGAGTTGGGAGATAGTAAAGCTCAGCTTCAGAACCCTCCGTTTCTGGAGAATGTTTCACATGGGCAGCTTCAGGCGCTTTCGGCTGTTCCTTCTGATAGTCTTGCTTTGGATCAGGATCGTGCTGAGTCTTCTTATGTTATTACTCCGCCTCCGATTTTGGAAGGACGTGGTGTTGTTAAACGCTTTGGAAGTAGGGTTCTTGTGCTTCCAATGCATTCAGATTGGTTTTCACCTGGAACAGTACACCGGTTAGAGAGACAAGCAGTGCCGCATTTCTTTTCAGGGAAATCACAGGATCTTACTCCTGAGAAGTACATGGAATGTAGGAATTATATTGTTGCATTATATATGGAAGAACCGGGGAAGAGGATTACCGCGTCTGATTGCCAGGGATTGCAGGTTGGGGTTGGTCATGAAGATTTGACTCGAATTGTTAGGTTTCTTGATCATTGGGGAATTATAAATTACTGTGCTCGGACGCCAAGTCACGAGCCTCCAAATGCCGTGTCTTGCTTGAAGGAGGATACTAGTGGAGAGATCCGTGTACCGTCGGAGGCCTTGAAGTCTATCGATAGTTTGATTAAATTTGATAAGACCAACTGTAAGCTTAAAGCAGAAGAAATTTATTCACCGTTGACAACGCATAGCGGTGATGTCCCTGATCTGGACAGCAGAATAAGAGAGCACCTGTCAGAAAATCATTGCAATTATTGTTCTTGTCCTCTTCCTGCTGTATACTATCAGTCTCAAAAAGAGGTTGATATTTTACTCTGCACTGATTGCTTTCATGATGGAAAATTTGTCGTTGGTCATTCAAGTATAGATTTTTTAAGGGTGGACTCATCAAGGGATTATGGTGAACTAGATGGGGAAAGTTGGACTGATCAAGAAACTTTGTTGCTGCTTGAAGCAATGGAGATTTACCATGAGAATTGGAATGAAATTGCTGAGCATGTTGGTACCAAGTCAAAAGCTCAATGCATTCTTCATTTTCTTCGTCTGCCCATGGAAGATGGAAAATTGGAAAATATCAATGTTCCAAGCATGTCTGTGTCATCCAATGTGATGAATAGAGATGATAATGGAAGATCACACCATTACTCAAACGGAGATTCTGCAGGACCTGTACATCAAGTCAGAGATTCCGACAGCCGCCTGCCTTTTGCCAATTCTGGAAATCCTGTTATGGCTCTGGTTGCCTTTTTAGCCTCTGCGGTTGGACCAAGAGTAGCAGCTTCTTGTGCTCATGCGGCATTATCAGTAATGTCGGAGGATAATACTGGCTCCCAGACTGAATCATCAGGACATGATAATAGGACAAATCCAGAAAACACACATTCTAGAGATGGTGGCTCTCGAGGAGAAACTGCAATTTCAAATAATCATAATGAGGATAAGGCAAAAGCACCTTGTTCGCGGGATCAAAGTGAGGGTAGGACAACCCCACTCTCTGCTGAAAAAGTTAAAGATGCAGCTAAAGCAGGCCTCTCTGCTGCAGCAATGAAAGCTAAATTGTTTGCCGATCACGAAGAACGAGAAATCCAGAGATTATGTGCTAATATAATTAACCATCAGTTGAAAAGATTGGAATTGAAGCTGAAACAGTTTGCAGAAATTGAAACATTGTTGATGAAGGAATGCGAGCAAGTGGAAAGGGCAAAACAGAGGTTTGCTGCAGAACGCACCCGAGTTATATCAGCACGTTTTGGAACTGCGGGAACTACACCTGCAATGAATGCATCAGGTGTTGGTCCTTCAATGACTAGTAATGGCAATAATAGGCAACAAATGATCTCTGCTTCTCCCTCACAGCCCAGCATCTCAGGGTATGGCAACAACCAGCCAGTTCATCCACACATGTCCTTTGCCCAAAGACCTTCAATGTTTGGGTTGGGGCAAAGGTTGCCCCTATCTATGATACAACAATCACAATCAGCTTCTTCAGCTCCCATGTTCAATGCCCCTAGTAATGTGCAGCCTGGTACCAATCATCCATTGTTGAGGCCTGTGTCAGGAACTAATTCTGGTTTAGGATAA 2349 0.4389 MPASPSDNRAKWRKRKRESRINQRQQKLQEEEEEDDEENPNADEDHDRDYDSDDQHHPNSQPQQEIEVLSDHAVQISQFPMVIKRAVNRPHSSVTAIVALERAMELGDSKAQLQNPPFLENVSHGQLQALSAVPSDSLALDQDRAESSYVITPPPILEGRGVVKRFGSRVLVLPMHSDWFSPGTVHRLERQAVPHFFSGKSQDLTPEKYMECRNYIVALYMEEPGKRITASDCQGLQVGVGHEDLTRIVRFLDHWGIINYCARTPSHEPPNAVSCLKEDTSGEIRVPSEALKSIDSLIKFDKTNCKLKAEEIYSPLTTHSGDVPDLDSRIREHLSENHCNYCSCPLPAVYYQSQKEVDILLCTDCFHDGKFVVGHSSIDFLRVDSSRDYGELDGESWTDQETLLLLEAMEIYHENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINVPSMSVSSNVMNRDDNGRSHHYSNGDSAGPVHQVRDSDSRLPFANSGNPVMALVAFLASAVGPRVAASCAHAALSVMSEDNTGSQTESSGHDNRTNPENTHSRDGGSRGETAISNNHNEDKAKAPCSRDQSEGRTTPLSAEKVKDAAKAGLSAAAMKAKLFADHEEREIQRLCANIINHQLKRLELKLKQFAEIETLLMKECEQVERAKQRFAAERTRVISARFGTAGTTPAMNASGVGPSMTSNGNNRQQMISASPSQPSISGYGNNQPVHPHMSFAQRPSMFGLGQRLPLSMIQQSQSASSAPMFNAPSNVQPGTNHPLLRPVSGTNSGLG 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06396 782 MobiDBLite consensus disorder prediction 527 592 - -
Mepo3g06396 782 MobiDBLite consensus disorder prediction 744 782 - -
Mepo3g06396 782 SUPERFAMILY Homeodomain-like 170 267 IPR009057 -
Mepo3g06396 782 Pfam SWIRM-associated region 1 598 674 IPR032451 -
Mepo3g06396 782 MobiDBLite consensus disorder prediction 563 577 - -
Mepo3g06396 782 Pfam SWIRM domain 174 260 IPR007526 GO:0005515
Mepo3g06396 782 Pfam Myb-like DNA-binding domain 396 438 IPR001005 -
Mepo3g06396 782 MobiDBLite consensus disorder prediction 30 44 - -
Mepo3g06396 782 CDD SANT 396 438 IPR001005 -
Mepo3g06396 782 ProSiteProfiles Zinc finger ZZ-type profile. 334 388 IPR000433 GO:0008270
Mepo3g06396 782 MobiDBLite consensus disorder prediction 45 60 - -
Mepo3g06396 782 MobiDBLite consensus disorder prediction 456 489 - -
Mepo3g06396 782 MobiDBLite consensus disorder prediction 1 65 - -
Mepo3g06396 782 FunFam SWI/SNF complex subunit SMARCC2 isoform C 393 443 - -
Mepo3g06396 782 ProSiteProfiles Myb-like domain profile. 396 439 IPR001005 -
Mepo3g06396 782 ProSiteProfiles SANT domain profile. 392 443 IPR017884 -
Mepo3g06396 782 PANTHER SWI/SNF COMPLEX-RELATED 188 671 - -
Mepo3g06396 782 SMART sant 393 441 IPR001005 -
Mepo3g06396 782 SUPERFAMILY Homeodomain-like 394 447 IPR009057 -
Mepo3g06396 782 Gene3D - 393 443 - -
Mepo3g06396 782 Coils Coil 14 34 - -
Mepo3g06396 782 ProSiteProfiles SWIRM domain profile. 171 269 IPR007526 GO:0005515
Mepo3g06396 782 MobiDBLite consensus disorder prediction 527 542 - -
Mepo3g06396 782 Gene3D - 177 264 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06396 Mepo-Chr3 78018374 78027018 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06396 339 435 EF-hand Containing Proteins AT3G07740 33.962 4.47e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06396 K11649 - gmx:100780440 1241.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06396 3 78018374 78027018 Mepo3g06396 3 78018374 78027018 ECH