Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06395 ATGAATTCATTGATTTCGTGTTCCATCCAGATAAGAGCAATGACGAAGAGAAAAAGATCACCCACAAAATCACTACCTCCTTCTCTTCCACCTTCAACACCACCAACACCCCAAACCCAAACCCGCCACTCCACCAACCTCTCAAAATCCCGGGTATGGATCCCTCTCAACATAACCCGACAAGAACTCTCCTTACCTCTCACCTTCCCCACCGGTCAAACCTTCCGCTGGAAAAACACCGCTCCTTCTCAATTCACTGGCGTCGTTGGGTCCCACCTCATTTCCCTCAAACACCTCCAAAACGGCGATGTTTGCTACACACTCCACTCCCAATCCTCCTCCTCTACCAATGATTGCAAAACGGCATTGCTTGATTTCTTAAACGCGGATGTTTCTCTTGCTGACACGTGGAAGGTGTTTTCGGATTCCGATGAAAGATTTGCGGAACTAGCGCAACATTTGAGTGGTGCTAGGGTTTTGAGACAAGATCCTTTTGAATGCTTGATTCAGTTCATGTGTTCTTCTAATAATCATATTAGCAGAATTACTAAAATGGTTGATTACGTTTCGTCTCTCGGGACTTACTTGGGTTGCGTCGAAGGCTTTGATTTCCACGCTTTCCCTACTCTTGAACAGCTTTCGTTGGTTTCTGAACAACAACTCAGAAATGCTGGTTTTGGTTACAGGGCTAAGTATATAACTGGCACTGTAAATGTTTTGCAATCAAGACCTGAAGGTGGGGAAGAATGGCTTTATTCTCTTCGCAAATTGGAGCTTCAAGATGTAATATCTGAACTTTCCAAGTTACCAGGAGTGGGTCCTAAAGTGGCTGCTTGTATAGCTCTTTACTCACTTGATCAACACCATGCAATTCCTGTTGATGTTCATGTTTGGCGGATTGCCCAAAAGTATATCTTACCCGAGCTTGCAGGTTTCAAGTTGACACAGAAACTTCACAGTCGTGTTGCAGAGGCTTTTGTAACAAAATATGGTAAATATGCCGGCTGGGCTCAAGCTGTTCTATTTATTGCTGAGTTGCCTTCACAAAAGGCCATTCTACCTTCACATTTGAGGGCTACCAAACAGCAGAGTCCAACAAAGATAGAAAACAGTGAAGAAGAAATTGGGATTACGGATGATAGAGTGAAGATGCAAACAGACCAGGGGAGAATTCACGGCTATTGA 1185 0.4414 MNSLISCSIQIRAMTKRKRSPTKSLPPSLPPSTPPTPQTQTRHSTNLSKSRVWIPLNITRQELSLPLTFPTGQTFRWKNTAPSQFTGVVGSHLISLKHLQNGDVCYTLHSQSSSSTNDCKTALLDFLNADVSLADTWKVFSDSDERFAELAQHLSGARVLRQDPFECLIQFMCSSNNHISRITKMVDYVSSLGTYLGCVEGFDFHAFPTLEQLSLVSEQQLRNAGFGYRAKYITGTVNVLQSRPEGGEEWLYSLRKLELQDVISELSKLPGVGPKVAACIALYSLDQHHAIPVDVHVWRIAQKYILPELAGFKLTQKLHSRVAEAFVTKYGKYAGWAQAVLFIAELPSQKAILPSHLRATKQQSPTKIENSEEEIGITDDRVKMQTDQGRIHGY 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06395 394 SMART endo3end 173 345 IPR003265 GO:0006284
Mepo3g06395 394 Pfam HhH-GPD superfamily base excision DNA repair protein 169 304 IPR003265 GO:0006284
Mepo3g06395 394 CDD ENDO3c 165 343 IPR003265 GO:0006284
Mepo3g06395 394 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 40 364 - -
Mepo3g06395 394 SUPERFAMILY TATA-box binding protein-like 45 162 - -
Mepo3g06395 394 Gene3D - 39 128 - -
Mepo3g06395 394 FunFam N-glycosylase/DNA lyase 163 287 - -
Mepo3g06395 394 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 56 168 IPR012904 GO:0003684|GO:0006289|GO:0008534
Mepo3g06395 394 FunFam N-glycosylase/DNA lyase OGG1 284 346 - -
Mepo3g06395 394 Gene3D Hypothetical protein; domain 2 163 287 - -
Mepo3g06395 394 Gene3D - 137 346 IPR023170 -
Mepo3g06395 394 MobiDBLite consensus disorder prediction 14 46 - -
Mepo3g06395 394 SUPERFAMILY DNA-glycosylase 163 344 IPR011257 GO:0003824|GO:0006281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06395 K03660 - gmx:100789749 530.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06395 3 78010478 78013315 Mepo3g06395 3 78010478 78013315 ECH