Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06394 ATGGGAGAGTGGTGGCGTTGTTTATTACATGCACTAATCTTAACCGTGTCTCTTTGCACGGTCCATGGTGGCAATGTTACCTACGACAGAACATCATTAGTCATTAACGGCCATCATAAAATCCTCTTCTCTGGTTCAATTCACTATCCTCGTAGCACTCCTCAGATGTGGCCTGACTTAATTTCTAAAGCCAAGGAAGGAGGATTAGATGTGATACAAACTTACGTGTTTTGGAATCTTCACGAGCCTCAAGAAGGCCAGTATGAGTTTAGTGGAAGGTTTGATTTAGTGGGATTCATTAAAGAAATTCAAGCACAAGGTTTATATGTGACCCTTCGAATTGGACCATACATTGAGAGTGAATGCACCTATGGGGGTCTACCATTATGGTTACATGATGTTCCTGGAATTGTATTTAGAACTGACAATGATCAATTCAAGTTTCACATGCAAAGATTCACTACCAAAATAATCAACATGATGAAATCAGTCAATCTTTTTGCTTCACAAGGAGGACCTATCATACTATCCCAGATTGAGAATGAATATGGTAGCATTCAAAGTAAGTTTCAAGAGAATGGGTTGCCTTATATTCGTTGGGCTGCTCAAATGGCCGTGGGACTTCAAACCGGTGTGCCTTGGATGATGTGCAAACAAGATGATGCTCCTGATCCAGTGATCAACGCATGCAATGGCATGCAGTGTGGGAGAAACTTTAAGGGGCCAAACTCACCTAACAAGCCTTCACTATGGACAGAGAATTGGACTAGTTTTTTACAAGCTTTTGGTGGAGCACCATACTTGAGATCAGCTTCAGACATTGCCTATAATGTTGCCTTGTTCATAGCAAAGAAAGGAAGTTATGTCAATTATTACATGTACCATGGAGGAACCAATTTTGATAGATTGGCCTCGGCTTTCATAATAACAGCTTATTATGATGAGGCTCCACTGGATGAATATGGTTTGGTTAGACAACCAAAATGGGGACATCTTAAGGAGCTACATACTGCAATCAAGTCATGTTCACAACCTCTACTTGATGGAACTCAAACCACCTTCAGCTTAGGTTCAGAGCAACAAGCTTATGTTTTCAGAAGTTCCACAGAATGTGCTGCCTTCTTGGAAAATAGTGGATCAAGGGATGTCACAGTCCAATTTCAAAATATTTCGTATCAATTGCCCGGGAAATCAATCAGTATCCTACCAGGCTGCAAGAATGTAGTCTTCAACACCGGCAAGGTGAGTATACAGAATAACGCCAGAGCAATGAAACCACGATCACAGTTCAATTCAGCTGAAAATTGGAAAGTGTATACAGAAGCCATCCCTAATTTTGCTGATACTTCGATAAAAGCAGACACATTATTAGATCAAATCAGCACAGCAAAAGATACATCTGACTATATGTGGTACACTTTCAGGTTTAATAACAAATCTCCTAATGCACAATCTGTTCTTAGTATATACAGCCAAGGACATGTTTTGCATTCATTCATCAATGGAGTTTTAACAGGTTCTGCACATGGAAGTCGCAACAATACACAAGTTACAATGGAGAAAAATGTCAATCTGATAAACGGGATGAACAACATCTCCATACTTAGTGCAACAGTGGGATTGCCGAACTCGGGAGCATTTCTAGAGACCAAGGTTGCTGGTTTGCGTAAAGTGGAAGTCCAAGGAAGAGATTTCAGTAGTTACTCATGGGGATATCAGGTTGGGTTGTTAGGAGAAAAATTGCAAATCTATTCAGTCAGTGGATCAAGTAAAGTTCAGTGGAAAAGTTTTCAAAGCTCTACTAAACCACTCACATGGTATCAGACCACATTCGATGCACCAGCTGGCAACGATCCTGTAGTGCTTAACCTTGGTTCTATGGGAAAGGGACTTGCTTGGGTTAATGGCCAAGGTATTGGACGATATTGGGTATCTTTCCACAAACCAGATGGAACTCCTTCACAACAATGGTATCACATACCACGTTCCTTCCTGAAATCGACCGGGAACCTACTTGTTATACTTGAAGAAGAAACTGGGAACCCCTTAGGAATCACTCTAGACACAGTATACATCAAGAATTGA 2085 0.4082 MGEWWRCLLHALILTVSLCTVHGGNVTYDRTSLVINGHHKILFSGSIHYPRSTPQMWPDLISKAKEGGLDVIQTYVFWNLHEPQEGQYEFSGRFDLVGFIKEIQAQGLYVTLRIGPYIESECTYGGLPLWLHDVPGIVFRTDNDQFKFHMQRFTTKIINMMKSVNLFASQGGPIILSQIENEYGSIQSKFQENGLPYIRWAAQMAVGLQTGVPWMMCKQDDAPDPVINACNGMQCGRNFKGPNSPNKPSLWTENWTSFLQAFGGAPYLRSASDIAYNVALFIAKKGSYVNYYMYHGGTNFDRLASAFIITAYYDEAPLDEYGLVRQPKWGHLKELHTAIKSCSQPLLDGTQTTFSLGSEQQAYVFRSSTECAAFLENSGSRDVTVQFQNISYQLPGKSISILPGCKNVVFNTGKVSIQNNARAMKPRSQFNSAENWKVYTEAIPNFADTSIKADTLLDQISTAKDTSDYMWYTFRFNNKSPNAQSVLSIYSQGHVLHSFINGVLTGSAHGSRNNTQVTMEKNVNLINGMNNISILSATVGLPNSGAFLETKVAGLRKVEVQGRDFSSYSWGYQVGLLGEKLQIYSVSGSSKVQWKSFQSSTKPLTWYQTTFDAPAGNDPVVLNLGSMGKGLAWVNGQGIGRYWVSFHKPDGTPSQQWYHIPRSFLKSTGNLLVILEEETGNPLGITLDTVYIKN 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06394 694 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
Mepo3g06394 694 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Mepo3g06394 694 PRINTS Glycosyl hydrolase family 35 signature 602 616 IPR001944 GO:0004553|GO:0005975
Mepo3g06394 694 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Mepo3g06394 694 PRINTS Glycosyl hydrolase family 35 signature 629 645 IPR001944 GO:0004553|GO:0005975
Mepo3g06394 694 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Mepo3g06394 694 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Mepo3g06394 694 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Mepo3g06394 694 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Mepo3g06394 694 PRINTS Glycosyl hydrolase family 35 signature 306 322 IPR001944 GO:0004553|GO:0005975
Mepo3g06394 694 Pfam Glycosyl hydrolases family 35 32 338 IPR031330 -
Mepo3g06394 694 Gene3D Glycosidases 24 343 - -
Mepo3g06394 694 SUPERFAMILY Galactose-binding domain-like 569 691 IPR008979 -
Mepo3g06394 694 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Mepo3g06394 694 FunFam Beta-galactosidase 292 417 - -
Mepo3g06394 694 PANTHER BETA-GALACTOSIDASE RELATED 16 691 IPR001944 GO:0004553|GO:0005975
Mepo3g06394 694 Gene3D - 565 692 - -
Mepo3g06394 694 SUPERFAMILY Galactose-binding domain-like 399 555 IPR008979 -
Mepo3g06394 694 FunFam Beta-galactosidase 572 694 - -
Mepo3g06394 694 Pfam Beta-sandwich domain in beta galactosidase 346 415 IPR041392 -
Mepo3g06394 694 FunFam Beta-galactosidase 22 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06394 Mepo-Chr3 78001417 78008852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06394 26 692 Glycoside Hydrolase AT5G63800 59.911 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06394 - - gmx:100789220 1161.75