Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo3g06384 | ATGGCGAAAAACGTTGCTATTTTCGGTTTATTGTTTTCTCTTCTTGCGTTGGTTCCTTCTCAGATCTTCTCCGAGGAATCATCAACTGATGCTAAGGAATTTGTTCTTACATTGGATAATACTAATTTCCATGACACTGTTAAGAAGCACGATTTCATCGTCGTTGAATTCTACGCACCTTGGTGTGGACACTGTAAGAAGCTAGCTCCAGAGTATGAGAAGGCTGCTTCTATCTTGAGCACTCACGAGCCACCAGTTGTGTTGGCTAAAGTTGATGCCAATGAGGAGCACAACAAAGACCTCGCATCGGAAAATGATGTTAAGGGATTCCCAACCATTAAGATTTTTAGGAATGGTGGAAAGAACATTCAAGAATACAAAGGTCCCCGTGAAGCTGATGGTATCGTTGAGTATTTGAAGAAGCAAAGTGGCCCAGCATCAACAGAGATTAAATCTGCTGATGATGCTACCGCTTTTGTTGGTGACAACAAAGTTGTTATTGTCGGAGTTTTCCCTAAATTTTCTGGAGAGGAGTACGATAACTTCATTGCCTTAGCAGAGAAGTTGCGCTCTGACTATGACTTTGCTCACACTTTGAATGCCAAACACCTTCCAAAGGGAGACTCATCAGTGTCTGGGCCTGTAGTTAGGTTATTTAAGCCATTTGACGAGCTCTTTGTGGACTCAAAGGATTTCAATGTTGAAGCTCTAGAGAAATTCATTGAAGATTCCAGTATCCCAATTGTGACTGTCTTCAACAATGAACCCAGCAATCACCCTTTTGTTGTCAAATTCTTTAACACTCCCAACGCAAAGGCTATGTTGTTCATCAACTTTACTGCCGAAGGTGCTGAATCTTTCAAATCAAAATACCATGAAATTGCTTCTCAATACAAACAACAGGGAGTTAGCTTTCTTGTTGGAGATGTTGAGTCTAGTCAAGGTGCCTTCCAGTATTTTGGACTGAAGGAAGACCAAGTGCCTCTTATTATTATTCAGCATAATGATGGCAAGAAGTTTTTCAAACCCAATTTGGAACTTGATCAACTCCCAACTTGGTTGAAGGCATACAAGGATGGTAAAGTTGAACCATTTGTCAAGTCTGAACCTATTCCTGAAACTAACAATGAGCCTGTTAAAGTGGTGGTTGGGCAAACTCTTGAGGACGTAGTTTTCAAGTCTGGGAAGAATGTTTTGATTGAGTTTTATGCTCCATGGTGTGGTCACTGCAAACAGTTGGCTCCAATCTTGGATGAAGTTGCTGTCTCATTCCAAAGTGATGCTGATGTTGTTATTGCAAAACTGGATGCAACTGCCAACGATATCCCAACCGACACCTTTGAAGTCCAAGGTTATCCAACCTTGTACTTCAGGTCAGCAAGTGGAAAACTATCACAATACGATGGCGGTAGGACAAAGGAAGACATCATAGAATTCATTGAAAAGAACAAGGATAAATCTGGTGTTGCTCATCAAGAAGCAGAACAACCAAAAGCTGCTGCTAAGCCAGAAGCAGAACAACCAAAAGATGAGCTTTGA | 1539 | 0.4126 | MAKNVAIFGLLFSLLALVPSQIFSEESSTDAKEFVLTLDNTNFHDTVKKHDFIVVEFYAPWCGHCKKLAPEYEKAASILSTHEPPVVLAKVDANEEHNKDLASENDVKGFPTIKIFRNGGKNIQEYKGPREADGIVEYLKKQSGPASTEIKSADDATAFVGDNKVVIVGVFPKFSGEEYDNFIALAEKLRSDYDFAHTLNAKHLPKGDSSVSGPVVRLFKPFDELFVDSKDFNVEALEKFIEDSSIPIVTVFNNEPSNHPFVVKFFNTPNAKAMLFINFTAEGAESFKSKYHEIASQYKQQGVSFLVGDVESSQGAFQYFGLKEDQVPLIIIQHNDGKKFFKPNLELDQLPTWLKAYKDGKVEPFVKSEPIPETNNEPVKVVVGQTLEDVVFKSGKNVLIEFYAPWCGHCKQLAPILDEVAVSFQSDADVVIAKLDATANDIPTDTFEVQGYPTLYFRSASGKLSQYDGGRTKEDIIEFIEKNKDKSGVAHQEAEQPKAAAKPEAEQPKDEL | 512 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo3g06384 | 512 | Coils | Coil | 510 | 512 | - | - | |
| Mepo3g06384 | 512 | FunFam | Protein disulfide-isomerase | 23 | 142 | - | - | |
| Mepo3g06384 | 512 | Pfam | Thioredoxin-like domain | 171 | 350 | - | - | |
| Mepo3g06384 | 512 | NCBIfam | protein disulfide-isomerase domain | 39 | 142 | IPR005788 | GO:0003756 | |
| Mepo3g06384 | 512 | NCBIfam | protein disulfide-isomerase domain | 383 | 483 | IPR005788 | GO:0003756 | |
| Mepo3g06384 | 512 | SUPERFAMILY | Thioredoxin-like | 35 | 145 | IPR036249 | - | |
| Mepo3g06384 | 512 | SUPERFAMILY | Thioredoxin-like | 245 | 376 | IPR036249 | - | |
| Mepo3g06384 | 512 | Gene3D | Glutaredoxin | 248 | 372 | - | - | |
| Mepo3g06384 | 512 | FunFam | Protein disulfide-isomerase | 143 | 243 | - | - | |
| Mepo3g06384 | 512 | Gene3D | Glutaredoxin | 373 | 488 | - | - | |
| Mepo3g06384 | 512 | NCBIfam | protein disulfide-isomerase | 35 | 512 | IPR005792 | GO:0003756 | |
| Mepo3g06384 | 512 | ProSiteProfiles | Thioredoxin domain profile. | 14 | 144 | IPR013766 | - | |
| Mepo3g06384 | 512 | FunFam | Protein disulfide-isomerase | 244 | 373 | - | - | |
| Mepo3g06384 | 512 | CDD | PDI_a_family | 36 | 139 | - | - | |
| Mepo3g06384 | 512 | SUPERFAMILY | Thioredoxin-like | 347 | 488 | IPR036249 | - | |
| Mepo3g06384 | 512 | MobiDBLite | consensus disorder prediction | 484 | 512 | - | - | |
| Mepo3g06384 | 512 | SUPERFAMILY | Thioredoxin-like | 148 | 247 | IPR036249 | - | |
| Mepo3g06384 | 512 | ProSitePatterns | Thioredoxin family active site. | 54 | 72 | IPR017937 | - | |
| Mepo3g06384 | 512 | CDD | PDI_a_PDI_a'_C | 378 | 480 | - | - | |
| Mepo3g06384 | 512 | PRINTS | Thioredoxin family signature | 61 | 70 | - | - | |
| Mepo3g06384 | 512 | PRINTS | Thioredoxin family signature | 106 | 117 | - | - | |
| Mepo3g06384 | 512 | PRINTS | Thioredoxin family signature | 53 | 61 | - | - | |
| Mepo3g06384 | 512 | CDD | PDI_b_family | 147 | 243 | - | - | |
| Mepo3g06384 | 512 | CDD | PDI_b'_family | 262 | 358 | - | - | |
| Mepo3g06384 | 512 | ProSiteProfiles | Thioredoxin domain profile. | 357 | 485 | IPR013766 | - | |
| Mepo3g06384 | 512 | Gene3D | Glutaredoxin | 144 | 247 | - | - | |
| Mepo3g06384 | 512 | Gene3D | Glutaredoxin | 25 | 143 | - | - | |
| Mepo3g06384 | 512 | PANTHER | PROTEIN DISULFIDE ISOMERASE | 12 | 487 | - | - | |
| Mepo3g06384 | 512 | Pfam | Thioredoxin | 379 | 482 | IPR013766 | - | |
| Mepo3g06384 | 512 | Pfam | Thioredoxin | 35 | 141 | IPR013766 | - | |
| Mepo3g06384 | 512 | ProSitePatterns | Thioredoxin family active site. | 399 | 417 | IPR017937 | - | |
| Mepo3g06384 | 512 | FunFam | Protein disulfide-isomerase | 374 | 487 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo3g06384 | Mepo-Chr3 | 77918487 | 77922829 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo3g06384 | K09580 | - | gmx:100170705 | 852.432 |