Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06358 ATGTCATCGAATTCAAAATACCCGATTCTGGATGATAAACCAATTGATAAGTGGAAGGTTACAGAGCTGAAAGAGGAACTGAAAAGAAGGAAGTTGGCTACCAAAGGTTTGAAGGAAGATTTAATTAATCGTTTGGATGAAGCCCTTCGCGAGGAAAGGGAGGCTGCTGAGGCTGCCCGCAAAAAGGAGGTCGTTGAGGCTTCCCTCGAACAGGAGGCTGCCGAGGGTTCGAAGAAGGATGAGGCTAACGGTTTGGACACTCAAGTTGATGAGGTAAAAGATTCCAAGACTATTAACTTGGACGCTGAAGTGGTTGGTACAATTCAAGCTTCTGAACAGGGGAATAGTGGTCTAGTTGAACCATTTGAAACGGATAATGCAGCAAAGGTTCCAGATGTTTTGGATAATGACGGCATTAAGATTGTCGACCAGGATGGTGTCACTGACCCAGTTGACGCTAATAATAGTGTGTCGGCAATGGATTTAGAAGGTGAACATGTGGAATCTGCTAACGCGGGAGAGGAGGCTGTTGCCCATCCTTCTAATGTGGAGACCACTGTTACGGTAACTGAGACTGTGGTCACCGAGACTGTATCAACAGAAGTAGTGGTCGACGGTCAGGATTCTTATAGTTCTAAGAAGAATAATGAGGATTCAGCAATCAAGCTAGGGAATGAGGAATCAAAGGCGCAGCTGGAGAGTGAGGACTCAAAGCCCCAACTGGAGTCTGACACAAAGCCCCCATGTGACGATCTCATGCCCAACTCTTCCGCTCCAGAAAACCAGGTATCTGAGGTCAACCCTAGTTTAGGGACTCAAGTAAAATCTGATTCTTTTTCTACTGATTCTGTGTCAATTAATCAAAAGAATGAACTAAAGGATACTATAATTGCTAATAATGTCAAATTAGAACAAGATAATGTTAGGCCAGAGATGGTGGAAGAACCATCATCCAGAAATGATGTACCTGTTTATGATGAATCGCATTCAGTGGATGTTGGAGGGCTGCATGAAAAAAAGTCATCTGTTGAAGAAAATAACAACAATGTTACGAGTCCAGAGTTGAACAAAACCAATAGTAGTGATGATGTAGGGTATACAGAAAAGTTGAACTTGGACAGAAGTTCTGGTGATGATTCCATGGAAGAGGACTTGCCTGAAATTAGGCAATATGATTCTAAGTTTAATGATGAACTTAGTGACAAAGTTGAGAATAACGAAGTCCTTATGGGGAAGGAGCACAACAAAACAATAGTTGTGGAAGATGGTGGATCCGCAAGAAACAGTGATACCCACCAAGATATGGACATTAGTACTGTTTCCTTGACTGAGAAGCGAAAATATCCTGAACAAACATTAATTGGGAACAATGAGCCTGCAAAAAGGCAACGCAGGTGGAACACTGAGGCAGTTAAAGGAGCAGATCTGCAAAGCACTACTCCCAGATCTGTTACTACACCCAAGGACGGGCAAATTACTCTGAAGCGCAACTTATCTAGGTCTAATTCATCTGCAACTGATGATACACCTAAAGAACGCATTGTTCCACCATCTCGAAGAGCCCCAACAAATTCCCTCAGGATTGATCAGTTCCTTCGTCCATTTACCCTAAAAGCAGTGCAAGAACTTCTTGGGAAAACTGGGAGTGTTAGCAGTTTCTGGATGGACCAAATAAAGACCCATTGCTATGTTACTTACTCGTCCACTGAAGAGGCCATTGAAACACGAAATGCTGTGTATAACTTGCAATGGCCTACAAATGGCGGGCGGCTCTTAATTGCTGAGTTTGTTGATCCTGAAGAAGTGAAAATGAAGTTAGAAGCTCCTCCCACTCCAACTGCTGCTGTCAACAGTGCTCCAATAGTTCCTTCCGCACCACCCTCTTCACAGCCGGAGCCTTCCCCTCGTCAGCACAGGGAGCAACATCTTCCAGTTACTCTCCCACCTCCACCACCATTGGTAAGGCCCCCACCAGTTGCTAGGGAACGCCTTCCATCGCCACCACCCCTTCCTGAGAAAGTGGACCCACCTATTGTCACTCTGGATGATCTCTTCCGTAAAACCACTGCAACTCCTCGGATCTATTATTTACCTTTGTCTGAAGAGCAAGTTGCTGCAAAACTTGCGGCACAGGGTAAGAATACGAGGCAGTAG 2154 0.4461 MSSNSKYPILDDKPIDKWKVTELKEELKRRKLATKGLKEDLINRLDEALREEREAAEAARKKEVVEASLEQEAAEGSKKDEANGLDTQVDEVKDSKTINLDAEVVGTIQASEQGNSGLVEPFETDNAAKVPDVLDNDGIKIVDQDGVTDPVDANNSVSAMDLEGEHVESANAGEEAVAHPSNVETTVTVTETVVTETVSTEVVVDGQDSYSSKKNNEDSAIKLGNEESKAQLESEDSKPQLESDTKPPCDDLMPNSSAPENQVSEVNPSLGTQVKSDSFSTDSVSINQKNELKDTIIANNVKLEQDNVRPEMVEEPSSRNDVPVYDESHSVDVGGLHEKKSSVEENNNNVTSPELNKTNSSDDVGYTEKLNLDRSSGDDSMEEDLPEIRQYDSKFNDELSDKVENNEVLMGKEHNKTIVVEDGGSARNSDTHQDMDISTVSLTEKRKYPEQTLIGNNEPAKRQRRWNTEAVKGADLQSTTPRSVTTPKDGQITLKRNLSRSNSSATDDTPKERIVPPSRRAPTNSLRIDQFLRPFTLKAVQELLGKTGSVSSFWMDQIKTHCYVTYSSTEEAIETRNAVYNLQWPTNGGRLLIAEFVDPEEVKMKLEAPPTPTAAVNSAPIVPSAPPSSQPEPSPRQHREQHLPVTLPPPPPLVRPPPVARERLPSPPPLPEKVDPPIVTLDDLFRKTTATPRIYYLPLSEEQVAAKLAAQGKNTRQ 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06358 717 Gene3D SAP domain 2 62 IPR036361 -
Mepo3g06358 717 MobiDBLite consensus disorder prediction 206 286 - -
Mepo3g06358 717 MobiDBLite consensus disorder prediction 456 522 - -
Mepo3g06358 717 MobiDBLite consensus disorder prediction 644 675 - -
Mepo3g06358 717 MobiDBLite consensus disorder prediction 52 90 - -
Mepo3g06358 717 MobiDBLite consensus disorder prediction 367 383 - -
Mepo3g06358 717 PANTHER SAP DNA-BINDING DOMAIN-CONTAINING PROTEIN 1 717 - -
Mepo3g06358 717 SUPERFAMILY RNA-binding domain, RBD 517 605 IPR035979 GO:0003676
Mepo3g06358 717 SUPERFAMILY SAP domain 15 52 IPR036361 -
Mepo3g06358 717 Pfam RNSP1-SAP18 binding (RSB) motif 672 714 IPR032552 -
Mepo3g06358 717 MobiDBLite consensus disorder prediction 345 366 - -
Mepo3g06358 717 MobiDBLite consensus disorder prediction 307 344 - -
Mepo3g06358 717 MobiDBLite consensus disorder prediction 610 678 - -
Mepo3g06358 717 CDD RRM_ACINU 523 603 IPR034257 -
Mepo3g06358 717 MobiDBLite consensus disorder prediction 219 245 - -
Mepo3g06358 717 MobiDBLite consensus disorder prediction 472 509 - -
Mepo3g06358 717 Pfam SAP domain 16 49 IPR003034 -
Mepo3g06358 717 MobiDBLite consensus disorder prediction 255 286 - -
Mepo3g06358 717 ProSiteProfiles SAP motif profile. 15 49 IPR003034 -
Mepo3g06358 717 MobiDBLite consensus disorder prediction 307 383 - -
Mepo3g06358 717 Coils Coil 38 75 - -
Mepo3g06358 717 SMART sap_9 15 49 IPR003034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06358 Mepo-Chr3 77668075 77671922 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06358 K12875 - gmx:100786288 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06358 3 77668075 77671922 Mepo3g06358 3 77668075 77671922 ECH