Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06356 ATGCCGTCACGGTGGCAGTTATTACTTCTTTTCTTACTCTCAACAACAGTTACTTCCGCAATGCCGGTTCAAACCACCTTTTCTGTAAAGCTGCTTCACCGATTCTCTGAAGAAATGAAACCGGTTCAGGTTCAAACCGGTGACTGGCCGGACCGGAGAACCATGCACTTCCACGAAAAGCTTCTTAGAAACGATTTTCTCAGACACAAGATCAACCTCGGTGGTGCTCGCCACAAGCTTCTGTTTCCTTCTCAAGGTAGCAAAACGATGTCGTTTGGGAATGACTTTGGCTGGTTACATTACACGTGGATTGATATAGGAACACCGAGTACTTCGTTTCTTGTAGCGTTGGATGCTGGAAGTGATCTTCTTTGGGTTCCTTGCGATTGTATACACTGTGCTCCTTTGTCTGCAAGTTTCTATTCCAATTTGGATAGAGATCTGAATGAGTATAGTCCCTCTCGATCATTATCCAGCAAGCATTTATCATGCAGCCACCGGTTGTGTGATATGGGTTCAAATTGTAAAAATTCGAAGCAACAACAGTGTCCGTACACAATCAATTACTTATCAGATAATACATCAAGTTCTGGATTGTTAGTTGAGGACATATTGCATCTTCAATCCGGCGACGGCAGCACATCTAACTCTTCTGTTCAGGCTCCAGTTGTTGTCGGGTGTGGTATGAAGCAAAGTGGTGGTTATTTGGATGGCACTGCTCCGGATGGTCTCATTGGTTTGGGACCCGGGGAGAGTTCAGTTCCGAGTTTTCTGGCTAAATCAGGATTAATCCGTGATTCTTTTTCGTTGTGCTTTAATGAAGATGACTCTGGTAGATTATTTTTTGGTGACCAGGGATCAACCGTGCAACAGTCTACTCCATTCTTGCTCTTGGATGGAATGTTTTCAACCTACATTGTTGGAGTGGAGACCTGTTGTATTGGGAACACTTGTCCTAAAGTAACAAGTTTTAATGCTCAGTTTGACAGTGGAACATCATTTACGTTTCTTCCTGGTCATGCATATGGAGCAATAGCTGAGGAGTTTGACAAACAAGTAAATGCTACAAGATCTACCTTTCAAGGATCTCCTTGGGAGTATTGTTATGTACCCAGTTCGCAACAGCTGCCTAAGATTCCCACGTTGACACTCATGTTCCAACAGAACAACAGTTTTGTGGTCTATAATCCCGTGTTTGTATCTTACAACGAGCAGGGAGTTGATGGGTTTTGTTTGGCAATACAGCCAACCGAAGGGGAAATGGGAACAATTGGACAAAATTTCATGACGGGATACCGGTTGGTATTTGATAGGCAAAACAAGAAGCTAGCATGGTCACACTCAAATTGTCAGGATCTCAGTCTAGGTAGGAGGATGCCCCTCTCCCCTCCGAATGGGACATCGTCAAGTCAGCTTCCTGCAGATGAGCAGCAAAGAACCAAAGGGCATGCAGTTGCTCCAGCTGTTGCTGTAAGGGCCCCTCAAAAACCTTCAGTTGCTTCATCTCAGACATCTTATATGATTTCATACTGGCGACATTGGCATTGCCATTGGTTGCTTCTATTTCATCTTCTGTTGGTCTTTTACTAA 1590 0.4403 MPSRWQLLLLFLLSTTVTSAMPVQTTFSVKLLHRFSEEMKPVQVQTGDWPDRRTMHFHEKLLRNDFLRHKINLGGARHKLLFPSQGSKTMSFGNDFGWLHYTWIDIGTPSTSFLVALDAGSDLLWVPCDCIHCAPLSASFYSNLDRDLNEYSPSRSLSSKHLSCSHRLCDMGSNCKNSKQQQCPYTINYLSDNTSSSGLLVEDILHLQSGDGSTSNSSVQAPVVVGCGMKQSGGYLDGTAPDGLIGLGPGESSVPSFLAKSGLIRDSFSLCFNEDDSGRLFFGDQGSTVQQSTPFLLLDGMFSTYIVGVETCCIGNTCPKVTSFNAQFDSGTSFTFLPGHAYGAIAEEFDKQVNATRSTFQGSPWEYCYVPSSQQLPKIPTLTLMFQQNNSFVVYNPVFVSYNEQGVDGFCLAIQPTEGEMGTIGQNFMTGYRLVFDRQNKKLAWSHSNCQDLSLGRRMPLSPPNGTSSSQLPADEQQRTKGHAVAPAVAVRAPQKPSVASSQTSYMISYWRHWHCHWLLLFHLLLVFY 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06356 529 Pfam Xylanase inhibitor N-terminal 101 284 IPR032861 -
Mepo3g06356 529 MobiDBLite consensus disorder prediction 455 487 - -
Mepo3g06356 529 SUPERFAMILY Acid proteases 95 451 IPR021109 -
Mepo3g06356 529 FunFam Aspartyl protease family protein 1 287 452 - -
Mepo3g06356 529 Gene3D Acid Proteases 285 452 IPR021109 -
Mepo3g06356 529 PANTHER ASPARTYL PROTEASES 9 443 IPR001461 GO:0004190|GO:0006508
Mepo3g06356 529 PRINTS Pepsin (A1) aspartic protease family signature 106 126 IPR001461 GO:0004190|GO:0006508
Mepo3g06356 529 PRINTS Pepsin (A1) aspartic protease family signature 422 437 IPR001461 GO:0004190|GO:0006508
Mepo3g06356 529 PRINTS Pepsin (A1) aspartic protease family signature 326 337 IPR001461 GO:0004190|GO:0006508
Mepo3g06356 529 ProSiteProfiles Peptidase family A1 domain profile. 100 446 IPR033121 -
Mepo3g06356 529 FunFam Aspartyl protease family protein 1 86 284 - -
Mepo3g06356 529 Gene3D Acid Proteases 76 284 IPR021109 -
Mepo3g06356 529 Pfam Xylanase inhibitor C-terminal 325 446 IPR032799 -
Mepo3g06356 529 MobiDBLite consensus disorder prediction 455 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06356 Mepo-Chr3 77629001 77632813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06356 100 453 Miscellaneous Gene Families AT1G77480 28.084 3.69e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06356 - - tpra:123903964 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06356 3 77629001 77632813 Mepo3g06356 3 77629001 77632813 ECH