Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06344 ATGGGAGACATTTCGCCAGAGAGAAAAGCAGGTTGTGGATTAATGACAACAGTATTTGGAAGACGGTCGAAAAAAACATCCTCTGTGGGTTCTGCTCCCATACCAAACAGCGTTAATGATCCAAAACGACGACGTGGTGGTTCTAAAGAGGTTGTTTCTGTCGATGCACCTTCACAAAATGTCCCAAACACTTCAACAACTCGTTCCGTGTCCAAGTCTTCTTGTTCATCAAATAATAATCCACAGAAAACGACAACGCCACGTGGACCATCAAAGGTTTCAAATTCATCAACTACTCAGGGGTATGTTAATCAAGGTAGGAGGGTTCCAAAAGAAGCTGTTGGTATTTCAGGTGAGTTAGAAAGCATGATCAATGATCATCAAAAATCCAAAGGAAGTAGTACTCTTATTCGCGCTTCGTCTGGCAATGTTATGTTGTATGGAAATTTAGGGAATCTTAGGCAAGGTGATAAAGATAATAGTTATTCAAATGCAATGGATAATTATAACCAGTATTTTGAAAATGCAAATTCAAATGCAAGAGGAGGACACACAAATAATGTAACGAGTGTTAGTAAAGAAACAAAATCATCCACCAACAAGTTGAAGGAAGAAAAATCACGTGGTGGTTCACTTTGTAGGGCTATATCAACTAGAATGGATCCAGAGCAGTTGAAAATAATGGGGAATGAGGATTATAAGAATGGAAGATTTGCGGAGGCGTTATCCTTATATGATGCAGCTATTGCAATTGATCCTAAAACAGCTTCTTATAGAAGTAATAGAAGTGCTGCTTTAACTGCTCTTGGTAGGCTTCTTGAAGCTGTGTTTGAATGTAGGGAAGCTATTCAAATCGATCCTCATTATCATAGAGCTCATCATCGACTAGGAAATTTGCACTTTAGATTAGGAGAAACAGATAAGGCGCTTTATCATTATAAACAAGCAGGACCAGAGGCTGATCCTGATGAGGTTGCTAAAGTGAAGATTCTTCAAGCTCATTTAAGCAAGTGCACTGAGGCTCGCAGGTTAGGAGATTGGAACAAACTAATTACCGAGACCTCCAAAATTCTATCATCCGGTGCAGATTCTGCTCCACAGATATTTGCACTGCAAGCCGAAGCGCTGATAAAACTCCGTAGGCATCAAGATGCAGACAATGTGATGTCAAAGTGTCCTCATTTTCATGTTGACGATTGTACCAAATTCTTTGGACCAATTGGTAATTCAAATTTGTTAGTGACACGAGCTCAAGTTGATATAGCTGCTGGCAGATTTGATGATGCTTTAGAGGCAGCACAGAAAGCAGCTAGACTAGACCCCAACAACAATTTAGCAAACAAGGTGTTGAGAAAGGCTCGAGCTGTGACAGCTGCAAGAGGAAGAGGAAACGAGCTTTTCAAGGCATCAAAATTCTCTGAGGCTTGCGTTGCATATGGAGAAGGGCTTGAGCATGATGGATATAACTCTGTTTTACTTTGCAACCGGGCGGCTTGTAGATCAAAACTCGGCCAATTGGAGAAAGCAGTTGAAGATTGTACCGCGGCGCTTAACTTGCGCCCATCTTACACCAAAGCAAGGATGAGAAGAGCTGATTGTAATGCTAAGATGGAAAGATGGGAAGCTTCAATAGGAGACTACGAAATCTTGTTAAGAGAGACACCAGAAGACGAGGAATTAAATCGAGCATTGTTGGAGGCTCGGGCACAACTTAAGAAACAACGAGGTGGATGA 1734 0.4123 MGDISPERKAGCGLMTTVFGRRSKKTSSVGSAPIPNSVNDPKRRRGGSKEVVSVDAPSQNVPNTSTTRSVSKSSCSSNNNPQKTTTPRGPSKVSNSSTTQGYVNQGRRVPKEAVGISGELESMINDHQKSKGSSTLIRASSGNVMLYGNLGNLRQGDKDNSYSNAMDNYNQYFENANSNARGGHTNNVTSVSKETKSSTNKLKEEKSRGGSLCRAISTRMDPEQLKIMGNEDYKNGRFAEALSLYDAAIAIDPKTASYRSNRSAALTALGRLLEAVFECREAIQIDPHYHRAHHRLGNLHFRLGETDKALYHYKQAGPEADPDEVAKVKILQAHLSKCTEARRLGDWNKLITETSKILSSGADSAPQIFALQAEALIKLRRHQDADNVMSKCPHFHVDDCTKFFGPIGNSNLLVTRAQVDIAAGRFDDALEAAQKAARLDPNNNLANKVLRKARAVTAARGRGNELFKASKFSEACVAYGEGLEHDGYNSVLLCNRAACRSKLGQLEKAVEDCTAALNLRPSYTKARMRRADCNAKMERWEASIGDYEILLRETPEDEELNRALLEARAQLKKQRGG 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06344 577 Pfam Tetratricopeptide repeat 493 522 IPR019734 GO:0005515
Mepo3g06344 577 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 12 576 IPR044534 -
Mepo3g06344 577 Gene3D Tetratricopeptide repeat domain 220 576 IPR011990 GO:0005515
Mepo3g06344 577 ProSiteProfiles TPR repeat profile. 410 443 IPR019734 GO:0005515
Mepo3g06344 577 SUPERFAMILY TPR-like 222 445 IPR011990 GO:0005515
Mepo3g06344 577 Pfam Tetratricopeptide repeat 229 288 - -
Mepo3g06344 577 MobiDBLite consensus disorder prediction 1 110 - -
Mepo3g06344 577 MobiDBLite consensus disorder prediction 20 35 - -
Mepo3g06344 577 ProSiteProfiles TPR repeat profile. 222 255 IPR019734 GO:0005515
Mepo3g06344 577 MobiDBLite consensus disorder prediction 53 105 - -
Mepo3g06344 577 MobiDBLite consensus disorder prediction 175 211 - -
Mepo3g06344 577 SUPERFAMILY TPR-like 458 573 IPR011990 GO:0005515
Mepo3g06344 577 SMART tpr_5 456 489 IPR019734 GO:0005515
Mepo3g06344 577 SMART tpr_5 490 523 IPR019734 GO:0005515
Mepo3g06344 577 SMART tpr_5 410 443 IPR019734 GO:0005515
Mepo3g06344 577 SMART tpr_5 222 255 IPR019734 GO:0005515
Mepo3g06344 577 SMART tpr_5 524 557 IPR019734 GO:0005515
Mepo3g06344 577 SMART tpr_5 256 289 IPR019734 GO:0005515
Mepo3g06344 577 SMART tpr_5 290 323 IPR019734 GO:0005515
Mepo3g06344 577 Pfam Tetratricopeptide repeat 292 322 IPR019734 GO:0005515
Mepo3g06344 577 MobiDBLite consensus disorder prediction 175 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06344 Mepo-Chr3 77510609 77512952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06344 234 526 Glycosyltransferase AT3G04240 21.502 8.70e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06344 - - gmx:100811282 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06344 3 77510609 77512952 Mepo3g06344 3 77510609 77512952 ECH