Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06313 ATGGGGAGAGGCAAAGGAGGGAAGAACCGAACTCAGCGCAAGCACTTCCAGCAAAATAGAGAGAACGTTTGGAAGCAACCGCGTTCAGAATCAGTTCCTTCTTCCAACACAAATACTCTGTTCGATATTCAAAATTCTGATTTCGATCACTATTACAAGGCGCAGAACATCGTTTCATTCGAAGAATGGGATTCGTTTATGCAAGTTCTTCGAACTCAGTTACCTGCAGCATTTCGAATCAATTCAAGTAGCCTTTTTCATGCTGATATCCGGTCCCAGCTGGAGAATGACTTTGCACCTGCTCTTCAGGCCATGGTTGATGAAGTGGATGAGGAGGAAGCTATTAGACCTTTGCCATGGTATCCTGAGAATCTTGCTTGGCATTCTAATTTTTCCCGTATGCAGCTTAGGAAGAATCAATCACTTAAGAGGTTTCATGAATTCTTAAAGCTAGAAAATGAAATTGGAAATATTACGAGACAGGAAGCTGTTAGCATGGTGCCTCCTCTGTTCTTAGATGTACATTCAAATCATGTTGTACTTGATATGTGTGCTGCACCAGGTTCAAAAACATTCCAATTGCTTGAGATTTTACATAGATCAGCTAAAGCCGGATCACTGCCTGATGGAATGGTTGTAGCAAATGATCTAGATGTACAAAGATGTAATCTTCTCATCCACCAAATAAAACGAATGTGCACAGCAAATCTAATTGTCACCAACCATGAAGCTCAGCACTTCCCAAGATGTCATTTTAACATGGATTGTGATATAATGGGTCCAGATCAGTATAATTCCCAACTGCTATTTGATCGTGTTCTATGTGACGTACCATGCAGTGGAGATGGTACCCTCCGCAAGGCACCCGATCTCTGGAGGAGATGGAACACAGGGACAGGAAATGGGCTTCACAACCTACAAATTTTAGTTGCCATGCGAGGCCTATCTTTACTTAAAGTTGGTGGAAGAATGGTTTATTCGACCTGCTCAATGAATCCTATTGAAAATGAAGCTGTCATTGCAGAGCTTTTGCGGAGGTGTGAAGGATCTATTGAACTTGTTGATGTCTCCAGTGAGCTTCCCCAACTTATTCGTCGTCCAGGTCTAAAGACATGGAAGGTATGTGACAAGGGCAAGTACTTGGTTTCCTGTAAAGAGGTTCCCAAGGTTCATAGAAATGTAGTTCTCCCCAGCATGTTTCCAAATGGTGGAAGCTATCAAGATATTGACTGTAACAGTAATTGTGATGTTAACGAACATTCTGAAGATGGTGTTCAAGAAGCGGAGAATCCTGTGATGCATGAGTTTACTGAGGAAGTTTCTGATTTCCCACTCGATCGATGCATGCGGTTACTGCCCCATGATCAGAACTCTGGAGCCTTCTTTATAGCCGTATTGCAAAAAGTTTCTCACCTGCCAGCAATTGAGGTAAAAATCAGAAAAAAAGTTGATAGGCAACATGTAGAATCAGTAAACCAGGGAAATGAGGATGCACAAGTATTGCAGATTAATCCATCAGAAAGTACACACGAAGAAGTTTGTGAACAAGTTTCCGAGGATAGCAAAAATGAACCCAGCACTGCAGATTTTAAATTTAGTCCTGTTATAGATGAAGGAGATTCTGAGGAAGCCCAGGAGCCCCACAATGAAGAAAACATAGCAAAGATCACTCCAAGCAAAAGAAAGCTTCAAATACAAGGCAAATGGAGAGGCGTTGACCCTGTAGTTTTCTTCAAAGATGAAGCGATTATTAAGAGCATAAAGGCATTTTATGGTATCAATGAGCATTTCCCATTAGATGGTCACCTTTTAACAAGAAACAGCGATACAAGCAATGTAAAAAGACTTTACTACATCTCCAAGCCAGTTAAGAATGTTCTTGAGTTGAACTTCTCAGTTGGACAGCAACTGAAAATAACTTCTGTTGGCGTGAAAATTTTTGAAAGACAAAAGTCACGTGAAGGTAGATCTGTAGAATGTGCTTTCCGAATCACTTCTGAAGGGTTGCCTCTTATCCTCCCTCACATCACCAAACAGATCCTAAGCGCATCTCCTATAGATTTCAAGCATCTTCTCCAGTATAAAAATATAAAATTCGCAGAATTCGTTGATGCCAACTTTGGTGAAAAGGCAGCAAACCTAATGCCAGGCTGTTGTGTGGTAGTTCTGGGTGAAGGGAACAGAACCGCCGCAGAGGCCCTCCATGTGGATGAATCATCAATAGCCATTGCATGCTGGAAAGGCGGGGCAAGTTTGACCGTGATGGTTACTTCAATAGAATGCCAAGAACTGCTTGAAAGGCTTTTAATGCGTTTAGACAGAGTCACTGAAAAGGGTTCCTCCATTCATGAGAACAAGCAGTCTAATAATGTGGAAGATGTAGAACAGGAGTCAAACGGTAACAGCCAAGATGTGGAAGCTACTTGA 2427 0.4174 MGRGKGGKNRTQRKHFQQNRENVWKQPRSESVPSSNTNTLFDIQNSDFDHYYKAQNIVSFEEWDSFMQVLRTQLPAAFRINSSSLFHADIRSQLENDFAPALQAMVDEVDEEEAIRPLPWYPENLAWHSNFSRMQLRKNQSLKRFHEFLKLENEIGNITRQEAVSMVPPLFLDVHSNHVVLDMCAAPGSKTFQLLEILHRSAKAGSLPDGMVVANDLDVQRCNLLIHQIKRMCTANLIVTNHEAQHFPRCHFNMDCDIMGPDQYNSQLLFDRVLCDVPCSGDGTLRKAPDLWRRWNTGTGNGLHNLQILVAMRGLSLLKVGGRMVYSTCSMNPIENEAVIAELLRRCEGSIELVDVSSELPQLIRRPGLKTWKVCDKGKYLVSCKEVPKVHRNVVLPSMFPNGGSYQDIDCNSNCDVNEHSEDGVQEAENPVMHEFTEEVSDFPLDRCMRLLPHDQNSGAFFIAVLQKVSHLPAIEVKIRKKVDRQHVESVNQGNEDAQVLQINPSESTHEEVCEQVSEDSKNEPSTADFKFSPVIDEGDSEEAQEPHNEENIAKITPSKRKLQIQGKWRGVDPVVFFKDEAIIKSIKAFYGINEHFPLDGHLLTRNSDTSNVKRLYYISKPVKNVLELNFSVGQQLKITSVGVKIFERQKSREGRSVECAFRITSEGLPLILPHITKQILSASPIDFKHLLQYKNIKFAEFVDANFGEKAANLMPGCCVVVLGEGNRTAAEALHVDESSIAIACWKGGASLTVMVTSIECQELLERLLMRLDRVTEKGSSIHENKQSNNVEDVEQESNGNSQDVEAT 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06313 808 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 355 374 IPR023270 GO:0016428
Mepo3g06313 808 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 637 649 IPR023270 GO:0016428
Mepo3g06313 808 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 127 148 IPR023270 GO:0016428
Mepo3g06313 808 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 60 469 IPR029063 -
Mepo3g06313 808 FunFam S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 43 385 - -
Mepo3g06313 808 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 66 469 IPR001678 GO:0008168
Mepo3g06313 808 PANTHER NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 12 781 IPR023267 GO:0001510
Mepo3g06313 808 MobiDBLite consensus disorder prediction 782 808 - -
Mepo3g06313 808 MobiDBLite consensus disorder prediction 488 510 - -
Mepo3g06313 808 MobiDBLite consensus disorder prediction 779 808 - -
Mepo3g06313 808 MobiDBLite consensus disorder prediction 22 38 - -
Mepo3g06313 808 PRINTS RNA (C5-cytosine) methyltransferase signature 271 283 IPR023267 GO:0001510
Mepo3g06313 808 PRINTS RNA (C5-cytosine) methyltransferase signature 181 191 IPR023267 GO:0001510
Mepo3g06313 808 PRINTS RNA (C5-cytosine) methyltransferase signature 451 468 IPR023267 GO:0001510
Mepo3g06313 808 PRINTS RNA (C5-cytosine) methyltransferase signature 321 337 IPR023267 GO:0001510
Mepo3g06313 808 Gene3D Vaccinia Virus protein VP39 43 468 IPR029063 -
Mepo3g06313 808 MobiDBLite consensus disorder prediction 1 38 - -
Mepo3g06313 808 Pfam 16S rRNA methyltransferase RsmB/F 171 355 IPR001678 GO:0008168
Mepo3g06313 808 ProSitePatterns NOL1/NOP2/sun family signature. 270 281 IPR018314 GO:0003723|GO:0008168
Mepo3g06313 808 MobiDBLite consensus disorder prediction 492 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06313 Mepo-Chr3 77211560 77219906 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06313 K15334 - gmx:100808598 1181.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04223 2 51023826 51031470 Mepo3g06313 3 77211560 77219906 PCT