Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06301 ATGGGACTTGTTTTTACCAAAAGGGCATGCATATTTTTACTGTGTTGTTTTTTCATCACTTCTGGAGTATATTCAGTGGAGGGGTTACATGGTGGATCTAAAGTCAGAGGAGTGAACTTAGGAGGGTGGCTTGTTATTGAAGGTTGGATCAAACCTTCACTGTTTGATGGCATTGCCAATGGAGACATGCTTGATGGGACAGAAGTGCAGCTTAAGTCAGTGACATTGCAGAAATATGTATCTGCAGACAATGGGGGAGGAATGAATGTGACAGCTGACAGGGATTCCCCATCTTCATGGGAAACGTTCAGGTTGTGGAGAGTATCTGAATCTGAATTTCAATTCCGTACCAATCAAGGCCCATTTCTTACATGTGATGGTGGAGGTAGCACTGTCTCTGCAACAGCAAAATCGCCTTCAATGTCAGAGACATTTGAAGTTAAGCGTAATGAGAAAAATAGGATTCACATCAAGATAAAGAATGGACCCTATCTTCAGGCTAAAACTGGTAATCAGCTCACAGCAGACTATTCAGGCGTACCCGGATGGGACGATAATTCAGCTACATTTGAAATGACAATTGTATCAAATAACCTACATGGAGATTACCAGCTAGCAAATGGTTATGGACATGAGAGCGCAGAAGATGTTCTTAGGAGACATAGAAATAGCTATATTACAGTAGAGGATTTCAAATTTCTATATGAACATGGAATAAATACTGTGAGGATACCAGTTGGGTGGTGGATTGCTTTTGATCCTGATCCTCCAAGTCCATTTATTGGAGGAAGTCTTGAAGCTCTAGATAATGCGTTTTCATGGGCACAAGAATATGATATAAAATGCATTATTGACCTTCATGCTGCTCCTGGTTCCCAAAATGGAATGGAGCATAGTGCAAGCAGAGATGGATTTACAGGCTGGCCAACTTCTCCAGATTACATTTCAAAGTCATTGCATGTTATTGAATTTTTAATTTCTAGATATGCAAAGCATCCTGCCTTGCTGGGAATTGAGCTTTTGAATGAACCATCAGCTGGCACAGTTTCTTTGGATATTTTAATTTCGTATTACAAGCAAGGCTACCAAATTGTTCGTAAATATTCGTCGTCAGCTTATGTGATAATGTGCCTGAGAATTGGCAATGCAGATCCTTTGGAGCTTTATCAAGCCAACATAGGATCTACCAACTTAGTTTTGGATTTGCATTTCTACAACCTCTTTGACACATTCTTTGTCAATATGAGTGCTGGTGATAATGTACAATACATATACAAAAGTCGGGAAGGTCTGTTGAAGGCCTTCAACAATTCAAATGGCCCACTCATTTTTATTGGAGAGTGGGTGAATGAGTGGGATGTGACAAGTGGATCCCAAACAGATTATCAGGACTTTGGAAAGGCACAGTTAGATGTCTATAATACAGCTTCCTTTGGTTGGTGTTACTGGACTTTAAAAAATGACAGGGAGCACTGGGATTTTGAATGGAACATTAGGAACAACTATCTTCAATTAGGTAAATCACCCAACAATCAGAACATATACTCTTTGGGACTGTCTGGATTGGCTTTCACCTTGTTTTATCTTCCTCACTTTTTGTGA 1602 0.3989 MGLVFTKRACIFLLCCFFITSGVYSVEGLHGGSKVRGVNLGGWLVIEGWIKPSLFDGIANGDMLDGTEVQLKSVTLQKYVSADNGGGMNVTADRDSPSSWETFRLWRVSESEFQFRTNQGPFLTCDGGGSTVSATAKSPSMSETFEVKRNEKNRIHIKIKNGPYLQAKTGNQLTADYSGVPGWDDNSATFEMTIVSNNLHGDYQLANGYGHESAEDVLRRHRNSYITVEDFKFLYEHGINTVRIPVGWWIAFDPDPPSPFIGGSLEALDNAFSWAQEYDIKCIIDLHAAPGSQNGMEHSASRDGFTGWPTSPDYISKSLHVIEFLISRYAKHPALLGIELLNEPSAGTVSLDILISYYKQGYQIVRKYSSSAYVIMCLRIGNADPLELYQANIGSTNLVLDLHFYNLFDTFFVNMSAGDNVQYIYKSREGLLKAFNNSNGPLIFIGEWVNEWDVTSGSQTDYQDFGKAQLDVYNTASFGWCYWTLKNDREHWDFEWNIRNNYLQLGKSPNNQNIYSLGLSGLAFTLFYLPHFL 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06301 533 Pfam Cellulase (glycosyl hydrolase family 5) 223 488 IPR001547 GO:0004553|GO:0071704
Mepo3g06301 533 Pfam Fascin domain 86 179 IPR022768 GO:0030674|GO:0051015
Mepo3g06301 533 SUPERFAMILY (Trans)glycosidases 34 504 IPR017853 -
Mepo3g06301 533 Gene3D Glycosidases 189 514 - -
Mepo3g06301 533 PANTHER FASCIN 33 505 IPR010431 GO:0007015|GO:0051015
Mepo3g06301 533 SUPERFAMILY Actin-crosslinking proteins 69 183 IPR008999 -
Mepo3g06301 533 Gene3D - 47 188 - -
Mepo3g06301 533 ProSitePatterns Glycosyl hydrolases family 5 signature. 336 345 IPR018087 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06301 Mepo-Chr3 77096726 77101168 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06301 - - tpra:123911124 960.674
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06301 3 77096726 77101168 Mepo3g06301 3 77096726 77101168 ECH