LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g06275	ATGAATCCATTATGCTGCATTGCTCCGGTTTCGATCGATCGAGACCGGAGTACTCCGGTGGTGTCGAAGTCAAACTCTCAGTGTCAATTAGGGTTAGATTCATCGATCAGAACTGTGAACTGTGCTTCTAAATCGAGTTTCTCAACACATGATTCATCGTTAGCAGGGGATTCGGTGAAATCCTCTTCTGCGGGTTTGAATCATGATGAAGATGATGTGGTGAATGAAGTTCGTGATTCGAAGGTGTTGAATGGTGGTGGTGTAGCTGGGAGTGTGGCGGGGATATTGTACAAGTGGGTGAATTACGGTAAGGGATGGAGGTCGAGGTGGTTTGTGCTGGAAGATGGTGTGCTTTCTTATTATAAGATTCATGGACCGGATAAGATCTTGATGAGTCCTGCTAAGGATAGGAGTGTGAGGGTGATCGGTGAGGAGTCGGCCAAGTTTGTGAAGAAGGCAAATTGGAACGTGAATCGAGGTAATGGAGCTACCAAGCAATGCAAGCCCTTTGGTGAGATACATTTGAAGGTTTCTTCAGTTCGCTTCAGCAAGTCTGATGACAAGCGGCTTTCCGTATTTACTGGGACAAAAACTCTTCATTTGAGGTGTGTATCTAGAGAAGACAGAGCCATGTGGATTGAAGCCCTGCAGTCTGCGAAAGATCTTTTTCCCAGGGCTCTGACAAGCAGCGATCTTGCAACTCCAGAAGATATCGTAGTTTCGACAGAGAAGCTGCGATCCAGATTGTCACAGGAAGGCATAAATGAAGAAATCATTAATGACTGCGAGTCTATTATGCTCTCGGAAGTCTCATATCTTCAAGGCAAGTTAAAGTTTCTTCAGCAGAAACATGTTATGTTGTTGGACACCTTAAAACAACTGGAGACGGAGAAAATAGAGTTGGAAACTACTGTAGTAGATGAAACAAAGGAACGTGAGTCATATTGCACACAAGGGAATAGAAGATATAGTGATTTCTATTCTGTTATGTCGGAAGGCAGTGCTACAGATTCAGTAGTAGATAATGAAAGTCAAGATGGAGCAGATGCTGAAACAGATGATGAAGATGGAACATATTTTGATACAAATGAGACGTTATATTCAGACGCCCTAAGAAGTGCTTCCTATCGAAGTAGAGAAGGTACAGGAAGTGCCAGTATATATGATAGAGATTACATTCTCCATGATGGTTTGCATGGGTTTGAGATGGCAATCAAGGATATAAGCTATCCTTATGTCAAAAGAAGGGATAATTTACCAGAACCAAAAGAGAAAGAGAAACCTGTTGGCTTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCTGGAGTTTGTCTCCCTGTTTATTTTAATGAACCACTCTCTTCATTGCAAAAGTGTTTTGAAGACCTCGAGTACTCAAACCTAGTTGATAGAGCATTGGAATGGGGAAAGCAGGGGAATGAATTGATGAGAATTCTAAATATTGCAGCTTTTGCTGTGTCCGGCTATGCGTCCACCGAAGGTCGACAGTGTAAACCTTTCAATCCTCTGCTTGGGGAGACTTACGAAGCTGACTATCCAGATAAAGGAGTTAAATTTTTTTCTGAGAAGGTTAGTCATCATCCAATGGTTGTTGCTTGTCACTGTGAGGGAAGAGGATGGAAGTTCTGGGCAGACTCCAATTTGAAAGGAAAGTTCTGGGGGCGTTCTATTCAGTTAGATCCCGTGGGTGTTCTCACCCTACAGTTTGAGGATGGTGAAACGTTTCAGTGGAGCAAGGTCACTACTTCCATATACAATATTATACTAGGTAAAATTTATTGTGACCACTATGGTACTATGCACATCAAGGGCAGCGGAAACTACTCTTGCAAACTTAAGTTCAAAGAGCAATCTATCATAGACCGTAATCCACATCAGGTCCATGGGTTTGTTCAAGACAACAGAACTGGAGAGAAGGTAGCAATGTTAATTGGAAAGTGGGATGAAGCAATGTATTATGTACTCGGGGATCCAACTACAAAGCCCAAAGGTTATGATCCTATGACAGAAGCTGCATTATTGTGGGAAAAGGACAACTATGTCCCCAAGACGAGATACAACCTCTCTCCCTTCGCAATTTCCTTGAATGAAATAATGCCTGGTTTATTGGTGAAGTTGCCTCCAACTGACTCAAGGTTGAGACCAGATCAGAGACATTTGGAAAATGGAGAATATGAATATGCAAATGCAGAGAAACTAAGGCTTGAACAGTTACAGAGACAGGCAAGAAAGATGCAAGAAAGAGGATGGCAGCCCAGATGGTTTAAGAAGCATGATGATGGTTCTTACCGATACATGGGTGGCTATTGGGAGGCAAGAGAAAAGAACAATTGGGATGGAATCTCTGATATATTTGGACAAGGCTGTGATTTGCCTTCATGTTCTGAAGAGATTGTATCCTACTGA	2436	0.4228	MNPLCCIAPVSIDRDRSTPVVSKSNSQCQLGLDSSIRTVNCASKSSFSTHDSSLAGDSVKSSSAGLNHDEDDVVNEVRDSKVLNGGGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILMSPAKDRSVRVIGEESAKFVKKANWNVNRGNGATKQCKPFGEIHLKVSSVRFSKSDDKRLSVFTGTKTLHLRCVSREDRAMWIEALQSAKDLFPRALTSSDLATPEDIVVSTEKLRSRLSQEGINEEIINDCESIMLSEVSYLQGKLKFLQQKHVMLLDTLKQLETEKIELETTVVDETKERESYCTQGNRRYSDFYSVMSEGSATDSVVDNESQDGADAETDDEDGTYFDTNETLYSDALRSASYRSREGTGSASIYDRDYILHDGLHGFEMAIKDISYPYVKRRDNLPEPKEKEKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSNLVDRALEWGKQGNELMRILNIAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGVKFFSEKVSHHPMVVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMHIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAALLWEKDNYVPKTRYNLSPFAISLNEIMPGLLVKLPPTDSRLRPDQRHLENGEYEYANAEKLRLEQLQRQARKMQERGWQPRWFKKHDDGSYRYMGGYWEAREKNNWDGISDIFGQGCDLPSCSEEIVSY	811

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g06275	811	FunFam	oxysterol-binding protein-related protein 1D isoform X1	516	689	-	-
	Mepo3g06275	811	Coils	Coil	277	311	-	-
	Mepo3g06275	811	FunFam	Oxysterol-binding protein-related protein 2A	727	797	-	-
	Mepo3g06275	811	SMART	PH_update	90	223	IPR001849	-
	Mepo3g06275	811	MobiDBLite	consensus disorder prediction	46	63	-	-
	Mepo3g06275	811	Pfam	Pleckstrin homology domain	94	218	-	-
	Mepo3g06275	811	MobiDBLite	consensus disorder prediction	334	359	-	-
	Mepo3g06275	811	Gene3D	-	89	223	IPR011993	-
	Mepo3g06275	811	SUPERFAMILY	Oxysterol-binding protein-like	425	796	IPR037239	-
	Mepo3g06275	811	MobiDBLite	consensus disorder prediction	46	69	-	-
	Mepo3g06275	811	Gene3D	-	516	683	-	-
	Mepo3g06275	811	Gene3D	-	727	793	-	-
	Mepo3g06275	811	ProSiteProfiles	PH domain profile.	89	221	IPR001849	-
	Mepo3g06275	811	PANTHER	OXYSTEROL-BINDING PROTEIN-RELATED	92	783	IPR000648	GO:0008289
	Mepo3g06275	811	CDD	PH_ORP_plant	95	225	-	-
	Mepo3g06275	811	Pfam	Oxysterol-binding protein	431	784	IPR000648	GO:0008289
	Mepo3g06275	811	Coils	Coil	738	758	-	-
	Mepo3g06275	811	MobiDBLite	consensus disorder prediction	344	359	-	-
	Mepo3g06275	811	SUPERFAMILY	PH domain-like	93	225	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g06275	Mepo-Chr3	76866983	76875502	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g06275	K20456		-	gmx:100817856	1479.15

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo3g06275	3	76866983	76875502	Mepo3g06275	3	76866983	76875502	ECH