Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06262 ATGTATGTGCAGTATGCAGAACAAGATGGAAAGCCTCTACCCAAATTTGGGGAATGGGATGTAAATGATCCATCCTCAGCTGAAGGGTTTACTGTTATATTCAACAAAGCCAGAGATGACAAGAAAATTGCTTCTGCATCTGGAAGATTTCCTTCACAACGAAGATATGACTCTCGTACCAGTCGCACCAACGATAATAACAAAAATTTAAAGGCTTCCTCAAAGAAAAAGTGGTTTTGCTTTGGCGCTTAG 252 0.4008 MYVQYAEQDGKPLPKFGEWDVNDPSSAEGFTVIFNKARDDKKIASASGRFPSQRRYDSRTSRTNDNNKNLKASSKKKWFCFGA 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06262 83 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 8 42 IPR008700 -
Mepo3g06262 83 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 7 80 IPR040387 -
Mepo3g06262 83 MobiDBLite consensus disorder prediction 55 69 - -
Mepo3g06262 83 MobiDBLite consensus disorder prediction 44 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06262 Mepo-Chr3 76747920 76748444 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06262 - - gmx:102669045 130.568