Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06259 ATGGCAATGATGCCGTACTACCTTTCTCGGTTACCTTATCAGGATTCTCTTCAAATACTTGAGGCTGATATTCAACAGGCTAATTCTTTGGCTGCTGCAATTCCAAGAGCAAAAGGAGGGACTCTTATTAAAATGAAATTGGTTTGCAATCAGTTGGCTCCACTATTACTATTATTTCTTCAATGGATGGATTGTTCTTGTGCTGGATTTTTGCATAGCTATCTCAATCTCTTCCACATACTTATATATAAGGAACCAAATGATGGTAGATCAAACATGTCTACTCGTGGAAGGAAGGCAACCATTAAGGACTTTTATGCCGTTATATTGCCATCTCTTCAGCGGCTTCATGGTAGTTTCGACGACACGTTGGAGACTTGTGAAGAAGGGAACACGAGTTTAGAAGGTTCAAACTGTGGCAATAAAGTAATCGAATTTGAAGGAGATGGGAAATTAACCAATGTTGATTTGCAAAGAGAAGATGAGTGTGGGATTTGCTTAGAGCCTTGTACCAAAATGGTTTTGCCTAATTGCTGCCACGCCATGTGCATCAAATGCTACCGCAAGTGGAACAGAAAGTCAGAGTCGTGTCCTTTTTGTCGCGGGAGCTTAAGGAGGGTTAATTCGGAGGATCTATGGGTATTAACTTGTGATGAAGATGTTGTTGATGCTGAAACAGTTTCTAAAGAGGATTTGTTGCGTTTTTACCTCTATATCAACAAGCTTCCTAAAGATAACCCTGATGCACTTTTCCTAATGTATTATGAATACCTCATTTAA 780 0.3962 MAMMPYYLSRLPYQDSLQILEADIQQANSLAAAIPRAKGGTLIKMKLVCNQLAPLLLLFLQWMDCSCAGFLHSYLNLFHILIYKEPNDGRSNMSTRGRKATIKDFYAVILPSLQRLHGSFDDTLETCEEGNTSLEGSNCGNKVIEFEGDGKLTNVDLQREDECGICLEPCTKMVLPNCCHAMCIKCYRKWNRKSESCPFCRGSLRRVNSEDLWVLTCDEDVVDAETVSKEDLLRFYLYINKLPKDNPDALFLMYYEYLI 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06259 259 FunFam RING/U-box superfamily protein 146 210 - -
Mepo3g06259 259 ProSitePatterns Zinc finger RING-type signature. 178 187 IPR017907 -
Mepo3g06259 259 SUPERFAMILY RING/U-box 154 205 - -
Mepo3g06259 259 PANTHER RING FINGER PROTEIN 41, 151 12 257 - -
Mepo3g06259 259 Pfam Ring finger domain 161 201 IPR001841 -
Mepo3g06259 259 SMART ring_2 163 200 IPR001841 -
Mepo3g06259 259 ProSiteProfiles Zinc finger RING-type profile. 163 201 IPR001841 -
Mepo3g06259 259 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 141 212 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06259 Mepo-Chr3 76724895 76727150 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06259 - - mtr:11441072 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06259 3 76724895 76727150 Mepo3g06259 3 76724895 76727150 ECH
Mepo3g06259 3 76724895 76727150 Mepo2g03828 2 47513231 47515683 PCT