Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06225 ATGTCGCTCGCATCATTCTCCATCATCCGCCACCACCGCACGGTGGCCACCGCCGCCCCTCAACTTCTCCACCACTTCCGCCACTTCCAAATCTCCGCCAGAAACCAAAACCCTAAACACGAAGCTCCAAGCAGGAATCTCCTCAAAGCAAAACGCACACTCAAAGATTTCTCATCTGTCGCTCCAATTCTCTCCCGCGAAGAAATTCCCCCTCTCTCCGAATCCCAAGCCGTCGGTGTCGTCGCTTCTTCCCAAGCCAATTTCATGCGCGTAATCATCCAACCACAACCTTCTGGAACCTTCCACGACGCTTCATCCGGAGGAGGAACTGAACTGTTATGCGTTGTGAGAGCGTTGCTGAAGAAGATAAAGCGTAGGGTTATGGTTGGAGATAAGGTTATAGTAGGTTCTGTTGATTGGGTTGATCGTAGGGGTATGATTGAGAATGTGTTTCAGAGAAATTCTGAAATGCTTGATCCTCCTGTGGCTAATGTAGATCATTTGCTTGTTCTGTTTTCGCTTGATCAGCCTAAGCTTGAGCCTTTTACGCTAACGCGGTTTTTGGTTGAAGCTGAGTCTACTGGGATTCCTCTCACCCTTGCTCTTAACAAGACTGAGCTTGTCGATAAAGAGACCATGGATTCCTGGAAGGCTAGGTTTCGTGGTTGGGGCTACCAGCCAATTTTTTGCAGTGTTGAATCCGGACATAACATTGATCTTCTCGCATTCCAATTGAGAGATCAAACAACAGTGGTTGTTGGTCCTAGTGGAGTTGGGAAGTCTAGTTTGATCAACGCCCTTAGAAGCAATCCTCGTACTTGTGATACTGCAGATGGGGAGAATTGGTTTGAACCTATTTTAGGTAGCAAGTGGTATGATGACCAGCGAGTTGCAGAGGTTTCAACAAGAAGTGGCAGGGGGAAACATACGACTCGTCATGTCTCTCTGCTTCCATTATCTGGAGGGGGTTATCTTGCTGATACTCCTGGATTTAACCAGCCTAGTTTACTGAAAGTGACAAAGCAATCTCTTGCACAAACTTTTCCCGAAATCAGGAAAATGCTTGGTGGAAATGAATCTGCAAAATGTTCATTTAACAATTGCTTGCATCTTGGTGAACCTGGCTGCATTGTGAAGGGGGATTGGGAAAGATATTCATTCTATTTTCAACTTCTTGATGAAATTAGAATCAGAGAGGAGTTCCAATTGAGGACATTTGGAACTAAAAGAGAAAGTGATGTAAGGTTAAAGACAGGAGATATGGGTTCTCAGCAAGCAGAACCACGTTTGGTGCTTAAGAAGCATAGAAGACAGTCTCGGAAGAAGACTAACCAATCAATTTTAGATGATCTCGATGATGACGACAATTTGCTTGACGAGGAGAACGACCCCCTTTTAAATGCTTTGAGAAATGAAAATCCTTAA 1425 0.4498 MSLASFSIIRHHRTVATAAPQLLHHFRHFQISARNQNPKHEAPSRNLLKAKRTLKDFSSVAPILSREEIPPLSESQAVGVVASSQANFMRVIIQPQPSGTFHDASSGGGTELLCVVRALLKKIKRRVMVGDKVIVGSVDWVDRRGMIENVFQRNSEMLDPPVANVDHLLVLFSLDQPKLEPFTLTRFLVEAESTGIPLTLALNKTELVDKETMDSWKARFRGWGYQPIFCSVESGHNIDLLAFQLRDQTTVVVGPSGVGKSSLINALRSNPRTCDTADGENWFEPILGSKWYDDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTKQSLAQTFPEIRKMLGGNESAKCSFNNCLHLGEPGCIVKGDWERYSFYFQLLDEIRIREEFQLRTFGTKRESDVRLKTGDMGSQQAEPRLVLKKHRRQSRKKTNQSILDDLDDDDNLLDEENDPLLNALRNENP 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06225 474 SUPERFAMILY Nucleic acid-binding proteins 77 153 IPR012340 -
Mepo3g06225 474 ProSiteProfiles EngC GTPase domain profile. 163 332 IPR010914 GO:0003924|GO:0005525
Mepo3g06225 474 Gene3D - 151 336 IPR027417 -
Mepo3g06225 474 Hamap Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 77 399 IPR004881 GO:0003924|GO:0005525
Mepo3g06225 474 Gene3D - 72 150 IPR012340 -
Mepo3g06225 474 CDD YjeQ_EngC 163 393 IPR004881 GO:0003924|GO:0005525
Mepo3g06225 474 Gene3D Probable gtpase engc; domain 3 338 400 - -
Mepo3g06225 474 NCBIfam ribosome small subunit-dependent GTPase A 127 270 IPR004881 GO:0003924|GO:0005525
Mepo3g06225 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 396 IPR027417 -
Mepo3g06225 474 Pfam RsgA GTPase 150 336 IPR010914 GO:0003924|GO:0005525
Mepo3g06225 474 MobiDBLite consensus disorder prediction 412 474 - -
Mepo3g06225 474 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 154 334 IPR030378 GO:0005525
Mepo3g06225 474 PANTHER SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 48 456 IPR004881 GO:0003924|GO:0005525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06225 K06949 - gmx:100796145 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06225 3 76414647 76417993 Mepo3g06225 3 76414647 76417993 ECH