Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06215 ATGGCTACCAACGAGGTTGAGAACAAGAACAAAGAACTAAAGCGCCTGGGGTTTGTGAAGATCGCTGCTATTCATACTTATGTCTTTGTCTCATATCTGTATGAATCCGCTAAGAAGAACTCAGGACCTTTGAGATCCGCTGTTGAAACAGTGGAGGGAACTGTAACCACTGTTGTTGGTCCTGTCTACAACAAATTCAAGGATGTCCCTGATGATGTCCTTGTGTTTGTTGACAACAAGGTGGATGAAGCAACTGACAAAGTCAGTGAGCATGCTCCTCATATTGCTAAGCAGCTTACGGACAAAGCAAAATTCTTGATTCAAAAAGTAACACATGAGGCAGGGAAAGTTGTGAGTGTGGGTCGATCTGGAGGACCAAGAGCAGCTGTAAATTATGTTGCTACAGAGACCAAGAATTTGGTACTAATCAATTCAGTGAAGCTGTGGACTGGACTCAACAAATTTCCACCATTCCATGCAGTGGCAGAGATGACAATTCCCACTGCTGCTCACTGGTCTGAGAAGTACAACCATGCAATCAAGGACATGGCTGGAAAGGGTTATAGTTTTGTTGGGTATTTACCTTTGATTCCTATTGATGATATATCTAAGGCATTTAAGCAGGGAGAAGTTAACGATAAGAAATCAGAATAA 654 0.422 MATNEVENKNKELKRLGFVKIAAIHTYVFVSYLYESAKKNSGPLRSAVETVEGTVTTVVGPVYNKFKDVPDDVLVFVDNKVDEATDKVSEHAPHIAKQLTDKAKFLIQKVTHEAGKVVSVGRSGGPRAAVNYVATETKNLVLINSVKLWTGLNKFPPFHAVAEMTIPTAAHWSEKYNHAIKDMAGKGYSFVGYLPLIPIDDISKAFKQGEVNDKKSE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06215 217 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 1 213 IPR008802 -
Mepo3g06215 217 Pfam Rubber elongation factor protein (REF) 8 208 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06215 Mepo-Chr3 76355959 76358541 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06215 - - tpra:123905869 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06215 3 76355959 76358541 Mepo2g03863 2 47871637 47873778 PCT