Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06214 ATGCGAACCAGAAGAGGTTTGTGTTATCCTCAAACACTTCAACTATCAAACATGTTTTCAGACACAAACAGTAACAAAAGACAGAAGAGAATGCCACAAAACACTTCTGATTTCTTTGAACTTTTGCCTGATGACATAGTTCTCTCTATACTTGGAAAACTTAGCTCCACCGCAACCTCTCCTTCAGATTTCATCAGTGTTCTAATCACATGCAAGAGACTAAACGGTTTAAGTCTTAACTCTGTTGTTTTGTCCAAAGCTGCGAACAAAACATTATCAGTCAAAGCTAAAAACTGGTGTGACTCTGCTCACCGTTTTCTCAAACGATGTGTTGATGCTGGAAACATTGAAGCTTGTTACACTCTTGGAATGATTCGGTTTTACTGTTTGCAAAATAGAGGAAGCGGTGCGTCGTTGATGGCAAAAGCCGCTATGAAATCTCACGCGCCATCTTTGTATTCATTGGCAGTGATTCAGTTCAATGGAAGCGGAGGAACAAAAAACGACAAAGATTTACGAGCCGGTGTTGCTTTATGTGCACGCGCTGCATTTCTCGGTCATATCGACGGTTTACGTGAGCTTGGTCATTGTTTACAAGACGGTTACGGCGTTAAACAGAGCGTTATTGAAGGTCGAAGGTTTCTAGTCCAAGCAAACGCACGTGAACTAGCTGCCGTTTTATCTAACGGCAACAACAACAACAAACAACCGTTACTGACGTGGAGTGTTAACCCGGGTTCAAACCAGCCACCACAGCTTCGTGTTTTAGCTGGTGCTGGTTCTGTTTCTGGTTCGGGTTGTCCTTTGCTGAGTGATTTTGGTTGTAACGTTCCGCTTCAGGAGACTCACCCGGCTAACCGGTTTATGACAGATTGGTTCGATATTCGAGGCGGGTTTCCTGGACCGGGTATGAGGTTATGTTCGAATTCTGGTTGTGGAAGACCTGAGACAAGGAAGCATGAGTTTCGAAGATGTTCGGTTTGCGGTGTTGTGAATTATTGCTCACGCGCTTGTCAAGCGCTTGATTGGAAGTTTCGACATAAGGCGGATTGTGCGCCGGTGGAGAGGTGGTTAGAGGAGGAGGAACATGTCGCCGGTGAAGGTGACGGTGGCGTTAACGTTGATGAGGTGGTTGTGCTTGATAGTTGA 1149 0.4517 MRTRRGLCYPQTLQLSNMFSDTNSNKRQKRMPQNTSDFFELLPDDIVLSILGKLSSTATSPSDFISVLITCKRLNGLSLNSVVLSKAANKTLSVKAKNWCDSAHRFLKRCVDAGNIEACYTLGMIRFYCLQNRGSGASLMAKAAMKSHAPSLYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDGLRELGHCLQDGYGVKQSVIEGRRFLVQANARELAAVLSNGNNNNKQPLLTWSVNPGSNQPPQLRVLAGAGSVSGSGCPLLSDFGCNVPLQETHPANRFMTDWFDIRGGFPGPGMRLCSNSGCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKFRHKADCAPVERWLEEEEHVAGEGDGGVNVDEVVVLDS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06214 382 FunFam Predicted protein 299 356 - -
Mepo3g06214 382 ProSiteProfiles Zinc finger MYND-type profile. 309 351 IPR002893 -
Mepo3g06214 382 CDD F-box_SF 42 78 - -
Mepo3g06214 382 Gene3D Tetratricopeptide repeat domain 78 237 IPR011990 GO:0005515
Mepo3g06214 382 Pfam MYND finger 311 351 IPR002893 -
Mepo3g06214 382 SUPERFAMILY HCP-like 100 218 - -
Mepo3g06214 382 SUPERFAMILY HIT/MYND zinc finger-like 307 356 - -
Mepo3g06214 382 Gene3D - 302 355 - -
Mepo3g06214 382 PANTHER MYND DOMAIN-CONTAINING 1 375 IPR044508 -
Mepo3g06214 382 SUPERFAMILY F-box domain 25 85 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06214 Mepo-Chr3 76340944 76343181 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06214 - - gmx:100798136 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06214 3 76340944 76343181 Mepo2g03867 2 47894750 47896592 PCT