LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g06207	ATGTCTCAGGTTGATAACAGGAATTCTTCCGCTGCCAAGCGTGCCAGGACTGATGGTAGCCGCAGGGAAGATGACTGGACATGTCCGAGCTGTGGCAATGTCAATTTCTCTTTCAGGACAACCTGCAATATGCGTAACTGCACCCAACCAAGGCCTGCCGATCATAATTCTAAATCTGCTGTGAAGCCTCTTCAAGCTCCACAGGCCTATTCATCTGCAGCTCCTTATCTAGGCTCCAACGCCCCCCCTTCAATTTATATTGGTGCCCCACCTTATGGGTCTTTATTCAATGGATCACCAGTTCCTCCCTATGAGGTTCCATTTACTGGAGGATCAGCCTATCAGTACAGCTATGGAAGCCGTGTTCCTGCTGGCAGTCCGTATAGACCATTACATCTAGCAGGACCAGCACCATACACCAGTGGAGCCGTAGTGGGACACGGTGGGATATATGCCATGCCCCAGCTATTGGATCGCTATGGCCTTGGTGTCCCTATTGGACCTGGAGCAATGCAGGGCACTAGGCCTGGATTTTTTCGCGATGACAAGTCTCAGAAAAAGGGACCAGATGCAACCCGTGACAATGATTGGGCTTGTCCAAAATGTGGCAACGTCAATTTCTCATTTAGAACTGTTTGCAACATGAGAAAGTGCAACACACCCAAACCCGGATCCCAGGCCTCAAAGTCTGATAAGAACACTAAGCAAAAGATGCCTGAGGGAAGCTGGAAGTGTGAAAAATGTAATAACATAAATTACCCATTCCGAACCAAGTGCAACAGACAGAATTGTGGTGCTGACAAGCCAGCTGAGTCGGAAAAATCTCCCTCATCATCTCCAGATCAAAATGAACAGGTTTGTCATGTAAAGCCTTTTCAATTTGCTAACCTTCATTTATTGTTGCAACAGAGATTGGTTTTTCATGAGCAGCTTTGTGACATAGTGAATATTTTCAAATTGAAAGCTGTTGTGGTGTTTTTGTTTAAATGGGTTTTTTTTCTGAAAAAGCTTCTCTTATGCTTCCTGTCATTTGGATTCTTTTGTTGCGACTTATATACATATTCACCTAGTTGA	1074	0.4516	MSQVDNRNSSAAKRARTDGSRREDDWTCPSCGNVNFSFRTTCNMRNCTQPRPADHNSKSAVKPLQAPQAYSSAAPYLGSNAPPSIYIGAPPYGSLFNGSPVPPYEVPFTGGSAYQYSYGSRVPAGSPYRPLHLAGPAPYTSGAVVGHGGIYAMPQLLDRYGLGVPIGPGAMQGTRPGFFRDDKSQKKGPDATRDNDWACPKCGNVNFSFRTVCNMRKCNTPKPGSQASKSDKNTKQKMPEGSWKCEKCNNINYPFRTKCNRQNCGADKPAESEKSPSSSPDQNEQVCHVKPFQFANLHLLLQQRLVFHEQLCDIVNIFKLKAVVVFLFKWVFFLKKLLLCFLSFGFFCCDLYTYSPS	357

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g06207	357	SUPERFAMILY	Ran binding protein zinc finger-like	233	270	IPR036443	-
	Mepo3g06207	357	MobiDBLite	consensus disorder prediction	1	27	-	-
	Mepo3g06207	357	SMART	zf_4	241	267	IPR001876	-
	Mepo3g06207	357	SMART	zf_4	24	50	IPR001876	-
	Mepo3g06207	357	SMART	zf_4	195	221	IPR001876	-
	Mepo3g06207	357	PANTHER	ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2 ZRANB2-RELATED	168	228	-	-
	Mepo3g06207	357	MobiDBLite	consensus disorder prediction	179	194	-	-
	Mepo3g06207	357	Gene3D	-	187	225	-	-
	Mepo3g06207	357	Gene3D	-	14	54	-	-
	Mepo3g06207	357	Gene3D	-	229	271	-	-
	Mepo3g06207	357	SUPERFAMILY	Ran binding protein zinc finger-like	17	54	IPR036443	-
	Mepo3g06207	357	MobiDBLite	consensus disorder prediction	11	25	-	-
	Mepo3g06207	357	MobiDBLite	consensus disorder prediction	220	241	-	-
	Mepo3g06207	357	FunFam	ranBP2-type zinc finger protein At1g67325-like	15	54	-	-
	Mepo3g06207	357	MobiDBLite	consensus disorder prediction	173	195	-	-
	Mepo3g06207	357	Pfam	Zn-finger in Ran binding protein and others	194	223	IPR001876	-
	Mepo3g06207	357	Pfam	Zn-finger in Ran binding protein and others	239	269	IPR001876	-
	Mepo3g06207	357	Pfam	Zn-finger in Ran binding protein and others	22	44	IPR001876	-
	Mepo3g06207	357	SUPERFAMILY	Ran binding protein zinc finger-like	187	225	IPR036443	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g06207	180	272	EF-hand Containing Proteins	AT1G55040	32.258	9.12e-07	48.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g06207	-		-	tpra:123907979	551.977

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo3g06207	3	76239828	76245289	Mepo3g06207	3	76239828	76245289	ECH