LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g06205	ATGGAAGGGCTGGCCATGCTGAAGCAGCTCATCGGTCAGCTTCAGCAACTTCTCGACTCTCATCATCATTCTTCTTCTTCTTCTTCCATTCTTCAACAACAACCTTCTCATCAAACCATCTTCCTTCAACATCACTCTCCCAGATGGACCCCCTTTGACCTTGAAGATAGTTCTGTAGATGACTGTTGTGGCCTTGTAATGGCAGCTGGAAAGTCTCATAGTTTCAGGATGTCGGAGCCTCTGAAACCTCCACCCGCTAAGAAGCCTCGAAGAGATCGAAGCAGGGGCAAATCATCAGGAAGATCCAGTACAAGTGAAGTTATGGAACAAGAAATATGGAAAGATTTTCCTGAAGATTTATTTGAGGCTGTAATTGCACGACTTCCCATTGCTGCGTTTTTCCGCTTCCGCTCTGTATGCCGTCAATGGAATTCCTTGTTGGCTTCTCAAAGCTTTTCTAAGCAATGTGTGGAAGTCCCGCAAGAAAACCCATGGTTTTACACCATAACCCATGAAAATGTGAATTCAGGAGCCATGTATGACCCTTCTTTGAAAAAGTGGCATCATCCATCTATATCACCACTGCCCACAAAGTTGATTGTTTTGCCTGTGGCTTCTGCTGGGGGTTTAGTTTGCTTTCTTGACATTGGCCACCGTAACTTCTATGTATGTAACCCACTGACTCAATCCTTCAAGGAGTTGCCAGCTCGGTCAGTTAAGGTCTGGTCTCGCGTTGCTGTAGGGATGACAGTGAATGGAAATTCAATTGGATCAGGCTACAAGATCCTATGGGTGGGTTGTGATGGAGAATATGAAGTTTATGACTCGGTGAGAAACTCTTGGAGTCGTCCAGGAAACATGCCTGGAAGTATGAACCTGCCATTGTCCCTTAACTTCAGGTCGCAAACTGTCTCTATTGACAGTACCTTATACTTCATGCGTTCAGATCCAGAAGGGGTTGTTTCCTATGATATGGCAACGGGGGTTTGGAAACAGTACATAATCCCAGCGCCACTACATCTGACTGACCACACTCTAGCTGAGTATGATGGCCAGATCATGCTTGTGGGCTTGCTCACAAAGAATGCAGCCACGTGTGTATGCATATGGGAGCTGCAGAGAATGACACTCTTGTGGAAGGAGGTAGACAGAATGCCAAATATATGGTGCTTGGACTTTTATGGTAAGCACGTCAGAATGACTTGCCTAGGGAACAAAGGCTTGCTCATGTTGTCCCTGAGATCGAAACAAATGAATCGGTTGGTTACTTACAACATAGCAAGGAAAGAATGGCTGAAGGTTCCTGGGTGTGTGGTGCCGAATGGGAAGAAACGGCAGTGGATAGCATGTGGTACTGCATTTCATCCATGCTTGACCGCCGTGGCTTGA	1389	0.4608	MEGLAMLKQLIGQLQQLLDSHHHSSSSSSILQQQPSHQTIFLQHHSPRWTPFDLEDSSVDDCCGLVMAAGKSHSFRMSEPLKPPPAKKPRRDRSRGKSSGRSSTSEVMEQEIWKDFPEDLFEAVIARLPIAAFFRFRSVCRQWNSLLASQSFSKQCVEVPQENPWFYTITHENVNSGAMYDPSLKKWHHPSISPLPTKLIVLPVASAGGLVCFLDIGHRNFYVCNPLTQSFKELPARSVKVWSRVAVGMTVNGNSIGSGYKILWVGCDGEYEVYDSVRNSWSRPGNMPGSMNLPLSLNFRSQTVSIDSTLYFMRSDPEGVVSYDMATGVWKQYIIPAPLHLTDHTLAEYDGQIMLVGLLTKNAATCVCIWELQRMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNKGLLMLSLRSKQMNRLVTYNIARKEWLKVPGCVVPNGKKRQWIACGTAFHPCLTAVA	462

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g06205	462	MobiDBLite	consensus disorder prediction	74	107	-	-
	Mepo3g06205	462	Pfam	F-box domain	113	152	IPR001810	GO:0005515
	Mepo3g06205	462	Gene3D	-	113	152	-	-
	Mepo3g06205	462	SMART	fbox_2	116	156	IPR001810	GO:0005515
	Mepo3g06205	462	FunFam	F-box only protein 6	113	152	-	-
	Mepo3g06205	462	ProSiteProfiles	F-box domain profile.	110	155	IPR001810	GO:0005515
	Mepo3g06205	462	SUPERFAMILY	Galactose oxidase, central domain	177	441	IPR011043	-
	Mepo3g06205	462	SUPERFAMILY	F-box domain	106	196	IPR036047	GO:0005515
	Mepo3g06205	462	CDD	F-box_AtFBW1-like	115	152	-	-
	Mepo3g06205	462	PANTHER	BNACNNG10540D PROTEIN	89	456	-	-
	Mepo3g06205	462	Gene3D	-	165	448	IPR015915	GO:0005515
	Mepo3g06205	462	FunFam	F-box only protein 6	163	449	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g06205	Mepo-Chr3	76215330	76219531	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g06205	-		-	gmx:100810179	783.482