Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06194 ATGTCTGCCGCCGTAGGAGCTGTCTCCTCCACAACCAATGATGTTCCTTACAACACACGTTTAGAGGAACAAGAAGATGATGCACCCAACTCCATCTCTGATGATGCTGAAGAAACTGAACCTGAAGATGATGATGATAAAGAATTGGATCTTGGTCCTCAATTTACCCTCAAAGAACAGCTTGAGAAAGATAAAGATGATGAAAGTTTGAGAAAATGGAAAGAGCAACTTCTGGGTAGTGTTGATATATCTGCTGTTGGAGAAAGCAAAGATCCAGAAGTGAAGATACAAAGCCTAACTATTACATGCTCAGAGAGGCCAGACCTTGTCCTGCCAATTCCATTTACTAATGATCCTAAGAAGAGTCTCTTCATTCTTAAGGAAGGAAGTCAATGTAGAATGAAATTCACCTTCACTGTCTCAAACAACATTGTTTCTGGTCTCAAATACACCAATGTTGTTTGGAAAACTGGGGTTAGAGTGGACAACAGAAAAAAAATGTTGGGAACTTTTAGTCCTCAGCATGAACCATATACATATGAATTGGAAGAAGAAACTACTCCTTCTGGTATATTTGCTAGAGGAACCTATGCAGCAAGAACCAAGTTTGTAGATGATGATAAAAAATGCTACTTGGATGTGAGTTACTACTTTGAAATTCAGAGGAACTGGGGAACACCTAACTGA 687 0.393 MSAAVGAVSSTTNDVPYNTRLEEQEDDAPNSISDDAEETEPEDDDDKELDLGPQFTLKEQLEKDKDDESLRKWKEQLLGSVDISAVGESKDPEVKIQSLTITCSERPDLVLPIPFTNDPKKSLFILKEGSQCRMKFTFTVSNNIVSGLKYTNVVWKTGVRVDNRKKMLGTFSPQHEPYTYELEEETTPSGIFARGTYAARTKFVDDDKKCYLDVSYYFEIQRNWGTPN 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06194 228 Gene3D Coagulation Factor XIII, subunit A, domain 1 46 225 IPR024792 -
Mepo3g06194 228 SUPERFAMILY E set domains 35 225 IPR014756 -
Mepo3g06194 228 MobiDBLite consensus disorder prediction 1 63 - -
Mepo3g06194 228 Pfam RHO protein GDP dissociation inhibitor 36 223 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Mepo3g06194 228 PANTHER RHO GDP-DISSOCIATION INHIBITOR 35 224 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Mepo3g06194 228 MobiDBLite consensus disorder prediction 1 18 - -
Mepo3g06194 228 MobiDBLite consensus disorder prediction 28 49 - -
Mepo3g06194 228 FunFam Rho GDP-dissociation inhibitor 1 47 226 - -
Mepo3g06194 228 PRINTS RHO protein GDP dissociation inhibitor signature 144 160 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Mepo3g06194 228 PRINTS RHO protein GDP dissociation inhibitor signature 161 176 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Mepo3g06194 228 PRINTS RHO protein GDP dissociation inhibitor signature 203 220 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06194 Mepo-Chr3 76102406 76103991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06194 K12462 - gmx:100806852 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06194 3 76102406 76103991 Mepo2g03888 2 48104487 48106308 PCT