Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06188 ATGGCCATCTTCTCTGCAACGCTAGGTTCCTTCGGTGCCATCTCCTTCCTCTCATCTTCACAGTCACAACAACACGATCCTTCTTCTTCCATCGTCAATCCTTTCAATTTCCCTAAATGCCCTCGCAAGTTACAACCACCTTGCCAGTGGCACTATCGTCATCACAATTCTAAAATCATGGTATCAAGTAGTAGTAGCAGCAACAATATTCATATTGATGAAGCAGACAGTGGTCTTCTTCAACGCCCTTCTGCTCCTGACTCTCATGATGCTCTTCGTCAAGCCAGGAGATCGTCAGATTGGAAGGCTGCAAACGCATATAGAGACAGTGGACTCATTTACAATGGTAGGGTTGAGGGTTTTAATGCTGGAGGCCTGCTGGTTCGGTTTTACTCTATCATGGGCTTTCTCCCATTCCCAGAGCTGAGCCCTATGCATAAAATACAAGAACCAGATAAAAATATCCGAGAACTCGCAAGAGAGTTGATTGGTTCCATCTTATCAGTGAAGGTAATTATAGTAGACGAGGAGAAACGGAAATTGGTCTTATCTGAAAAGGAAGCTTCATGGTTTAAATATGCAAAACATATCAACATAGGGGACCTTTTTGAAGCAAGAGTCGGTTCTGTTGAGGACTATGGTGCTTTTGTTCATCTGCGCTTCCCTGACGGTCTTTATCACCTTACCGGACTAGTACATGTCTCAGAAGTGTCGTGGGATCTAGTTCAAGATGTAAGAGACTTCTTAAGAGAAGGTGAAGAAGTGAGGGTCAAAGTTATCGGTATTGATACTGTAAAGATGAGGCTTACACTGTCAATGAAACAGCTAGAAGAAGATCCACTGCTAGAAACTCTGGACAAAGTAATACCTCAGGATGGTTCAGCTGTTCCCGATTCTTTCAGCAGTACCACTAGCAGTCCCATCGATCCCCTACCGGGGCTGGATACAATTCTTAAAGAGCTATTGCAGGAAGATGGCATATACGAGGCAAGAATCAGCCGTCAGGGGTTTGAAAAACGAGTGGTCTCACAAGACTTGCAGCTTTGGCTTTCTAATGCACCTCCCATGGACCAAAAGTTTACTCTCCTTGCTCGAGCTGGAAGACAGGTTCAGGAGATACATTTGAAAACATCCCTTGACCAGGAAGGTATCAAAAAGGCAATACAACGAGTACTGGAGCGTGTTCCTTGA 1191 0.4442 MAIFSATLGSFGAISFLSSSQSQQHDPSSSIVNPFNFPKCPRKLQPPCQWHYRHHNSKIMVSSSSSSNNIHIDEADSGLLQRPSAPDSHDALRQARRSSDWKAANAYRDSGLIYNGRVEGFNAGGLLVRFYSIMGFLPFPELSPMHKIQEPDKNIRELARELIGSILSVKVIIVDEEKRKLVLSEKEASWFKYAKHINIGDLFEARVGSVEDYGAFVHLRFPDGLYHLTGLVHVSEVSWDLVQDVRDFLREGEEVRVKVIGIDTVKMRLTLSMKQLEEDPLLETLDKVIPQDGSAVPDSFSSTTSSPIDPLPGLDTILKELLQEDGIYEARISRQGFEKRVVSQDLQLWLSNAPPMDQKFTLLARAGRQVQEIHLKTSLDQEGIKKAIQRVLERVP 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06188 396 Gene3D - 101 192 IPR012340 -
Mepo3g06188 396 ProSiteProfiles S1 domain profile. 111 186 IPR003029 GO:0003676
Mepo3g06188 396 ProSiteProfiles S1 domain profile. 200 274 IPR003029 GO:0003676
Mepo3g06188 396 Pfam S1 RNA binding domain 198 274 IPR003029 GO:0003676
Mepo3g06188 396 SUPERFAMILY Nucleic acid-binding proteins 111 186 IPR012340 -
Mepo3g06188 396 SUPERFAMILY Nucleic acid-binding proteins 187 279 IPR012340 -
Mepo3g06188 396 SMART S1_6 198 274 IPR022967 -
Mepo3g06188 396 SMART S1_6 109 186 IPR022967 -
Mepo3g06188 396 PANTHER OS03G0844900 PROTEIN 30 396 - -
Mepo3g06188 396 Gene3D - 193 276 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06188 Mepo-Chr3 76069390 76075217 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06188 - - gmx:100798303 540.036