Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06179 ATGTCGGAGATGGCGAACACAGATCCCGATGGAATCGACGGAGTTCGTATGACATGGAACATCTGGCCACGTAGCAAAGTAGAATCCTCCAAATGCGTTATCCCACTCGCCGCCACAATCTCCCTCATCCGTTCTCATCCCGATATCCCTAGTCTTCCCTATGCACCCCTCCGTTGCAAAACCTGCACCTCCATTCTCAACCCTTACTCCCGCGTTGATTTCACCGCTAAGATCTGGATCTGTCCATTTTGTTATCAACGTAACCATTTTCCACCTCATTACAACGCTATTTCTGAAACTAATCTCCCTGGTGAACTCTATCCTCAATACACCACCGTTGAATATCATATCCCTCATACCGATCCTAATCCTCCTCCTTCTCCTGTTTTTCTCTTTCTGCTTGATACTTGTATCATTGAAGAAGAGATTAATTTTCTCAAATCGGCTCTTGGTAGAGCAATTGGCCTTTTGCCTGATAATGCTCTTGTTGGGTTTTTATCCTTTGGGACTCAGGTTCAGGTTCATGAATTGGGATTTTCTGATATGTCTAAAGTTTATGTTTTTCGAGGATCCAAAGAGATTTCTAAAGATCAGATTTTGGAACAATTGGGTCTTGCTTCTTCTAATTCTGCTGCTAGGAGACCGATCAAAGGTGGTCCTGGTGGTATTGTTGGTGTTGCTCCTTTTCCCAATTCCGGTGTTTCGCGGTTTTTGTTGCCTGCTTCTGATTGTGAATATACTCTCAATGCGCTGTTGGAGGAATTGCAGAGAGATCAATGGCCTGTTCCACCTGGCAAACGACCTGCTCGATGTACCGGAGTTGCATTGAGTGTTGCAGCTGGATTGCTCAGTGCTTGTAATCCTGGGACTGGGGCTAGAATTATAGCTTTGGTTGGAGGGCCATGCACTGAAGGACCTGGCACGATTGTGTCGAAAGAACTATCTGACCCAGTGCGTTCTCATAAAGATCTTGATAAAGATGCGGCACCTTACTTTAAGAAAGCAGTGAAGTTTTATGAGGGTCTTGCAAAACAGCTGGTTAGCCAGGGTCATGTGTTAGATCTTTTTGCATCAGCACTTGATCAGGTTGGAGTTGCAGAAATGAAAGTCGCAGTTGAAAGAACTGGTGGCCTTGTTGTCCTGTCTGAAAGTTTTGGTCATTCAGTCTTCAAGGACTCTTTTAAGCGTGTTTTTGAGGATGGGGAGCAATCTCTTGGTCTCTGTTTCAATGGGACCCTTGAGATAAATTGCTCAAAGGAAATCAAAATTCAGGGAATTGTTGGACCTTGCACATCGATGGAGAAGAAAGGACCTTCTGTTGCTGATACCGTCATAGGAGAGGGGAACACAACAGTATGGAAGATGTGTGGTCTTGACAAGAGTACATGCTTGACTGTGATGTTTGATCTTTCATCAAGTGATCGTTCAAATACTCCAGGTGGTGTCAACCCACAACTGTACCTGCAGTTCCTTACAAGTTACCAGGGCCCAGATGGTCAATTAGTGCTTCGTGCGACAACAGTAACTAAAAGATGGGTAGATAGTGCTGTTAGCTCTGAGGAATTGGTTCAAGGATTTGACCAAGAAACTGCTGCAGTTGTAATGGCTAGATATGCTTCTCTGAAAATGGAGACAGAGGAAACATTTGATTGCACACGGTGGTTGGATAGGTTCCTCATTCGCCTCTGTTCTAAGTTTGGGGACTACCGCAAGGATGATCCATCATCTTTTACATTAAATCCATCATTTTCTCTTTTCCCCCAGTTTATGTTCAATCTGCGACGCTCACAGTTTGTACAGGTTTTTAACAACAGTCCAGATGAGACTGCATACTTTCGCATGTTGTTAAACCGGGAACATATTAGTAATGCGGCTGTCATGATTCAGCCATCACTAATATCATATTCATTTAATTCACTGCCTGCACCAGCATTGTTGGATGTGGCTTCCATTGCTGCAGACCGGATTCTGTTGCTAGATTCATATTTTAGTGTGGTTATTTTTCATGGGATGACAATAGCTCAATGGCGCAACTTGGGATATCAGAACCAACCAGAACACCAGGCTTTTGCACAACTGTTACGAGCTCCACAAGATGATTCCCAAGCAATAATTAGAGATCGGTTTCCTGTTCCTAGATTGGTAGTGTGTGATCAACATGGTTCCCAGGCTAGATTTTTATTAGCAAAACTAAATCCATCAGCAACATATAATAATGCGCACGAGATGGCTGCTGGTTCAGATGTAATCTTTACTGATGATGTTAGCCTTCAAGTTTTCTTTGAGCATCTGCAAAGGCTGGCTGTCCAATCTTGA 2316 0.4365 MSEMANTDPDGIDGVRMTWNIWPRSKVESSKCVIPLAATISLIRSHPDIPSLPYAPLRCKTCTSILNPYSRVDFTAKIWICPFCYQRNHFPPHYNAISETNLPGELYPQYTTVEYHIPHTDPNPPPSPVFLFLLDTCIIEEEINFLKSALGRAIGLLPDNALVGFLSFGTQVQVHELGFSDMSKVYVFRGSKEISKDQILEQLGLASSNSAARRPIKGGPGGIVGVAPFPNSGVSRFLLPASDCEYTLNALLEELQRDQWPVPPGKRPARCTGVALSVAAGLLSACNPGTGARIIALVGGPCTEGPGTIVSKELSDPVRSHKDLDKDAAPYFKKAVKFYEGLAKQLVSQGHVLDLFASALDQVGVAEMKVAVERTGGLVVLSESFGHSVFKDSFKRVFEDGEQSLGLCFNGTLEINCSKEIKIQGIVGPCTSMEKKGPSVADTVIGEGNTTVWKMCGLDKSTCLTVMFDLSSSDRSNTPGGVNPQLYLQFLTSYQGPDGQLVLRATTVTKRWVDSAVSSEELVQGFDQETAAVVMARYASLKMETEETFDCTRWLDRFLIRLCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNREHISNAAVMIQPSLISYSFNSLPAPALLDVASIAADRILLLDSYFSVVIFHGMTIAQWRNLGYQNQPEHQAFAQLLRAPQDDSQAIIRDRFPVPRLVVCDQHGSQARFLLAKLNPSATYNNAHEMAAGSDVIFTDDVSLQVFFEHLQRLAVQS 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06179 771 Pfam Sec23/Sec24 beta-sandwich domain 409 512 IPR012990 -
Mepo3g06179 771 Gene3D Sec23/Sec24 helical domain 524 768 - -
Mepo3g06179 771 Pfam Sec23/Sec24 trunk domain 125 398 IPR006896 GO:0006886|GO:0006888|GO:0030127
Mepo3g06179 771 SUPERFAMILY Helical domain of Sec23/24 527 629 IPR036175 GO:0006886|GO:0006888|GO:0030127
Mepo3g06179 771 Pfam Sec23/Sec24 helical domain 527 623 IPR006900 GO:0006886|GO:0006888|GO:0030127
Mepo3g06179 771 SUPERFAMILY vWA-like 128 399 IPR036465 -
Mepo3g06179 771 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 7 770 IPR037364 -
Mepo3g06179 771 FunFam Protein transport protein SEC23 53 112 - -
Mepo3g06179 771 Pfam Gelsolin repeat 639 727 IPR007123 -
Mepo3g06179 771 Gene3D Severin 629 733 IPR029006 -
Mepo3g06179 771 Gene3D von Willebrand factor, type A domain 124 407 IPR036465 -
Mepo3g06179 771 FunFam Protein transport protein SEC23 127 408 - -
Mepo3g06179 771 Gene3D - 53 112 - -
Mepo3g06179 771 Gene3D - 12 509 - -
Mepo3g06179 771 FunFam Protein transport protein SEC23 629 733 - -
Mepo3g06179 771 FunFam Protein transport protein SEC23 524 645 - -
Mepo3g06179 771 Pfam Sec23/Sec24 zinc finger 56 94 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Mepo3g06179 771 SUPERFAMILY beta-sandwich domain of Sec23/24 9 526 - -
Mepo3g06179 771 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 630 770 IPR036180 -
Mepo3g06179 771 SUPERFAMILY Zn-finger domain of Sec23/24 47 119 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Mepo3g06179 771 CDD Sec23_C 619 739 IPR037550 GO:0030127|GO:0090114
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06179 Mepo-Chr3 75984017 75990384 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06179 K14006 - gmx:100813940 1386.32