Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06161 ATGCTTGTTATTGCTTCACGCAGCGTATGTTCTAGAATAACGCCTAATACAGGTTCTACCTTTGATGTTCTTACATATGGTGCCATCGGGGATGGCCAAACTGATGATTCAAATGCTTTTTTAAAAGCATTTAACGATGCATGTGGTACAACTGAGGGCACCCCAACAATGACCATACCCGAAGGAAAAACATTCTTGTTGCAACCTTTGGTGTTCAAAGGTGACGATTGCATCGCCATTAACAATGGCTCAAGTGTCATCACCATAACCGGTATTTTTTGTGGACCAGGCCACGGGATCAGTGTTGGTAGCCTCGGAAAAGATAATTCATATGCTACGGTAGAAGATGTACGTGTTCAAAATTGCACATTCACCGGAACTTCAAATGGAGGTAGAATCAAGACATTTGAGGGAGGATCTGGATATGCGAGGAATATTACATACGAAGATATTATACTTAATGAAGTCAAGAATCCCGTGATTATTGACCAAGAGTATAAACCTAACGCAGACAGTGCTGTGGAAATTAGTGGTGTTACTTACAGCAACATACGTGGAACCTCGGTTGGTGACTATGCAATCGAACTTAAATGTGAACACAACATTGGTTGCACCGACATTGTTCTCGATCATATTAACATAACACGTGCTGATGGAGGGGAAGCAGGTGTAATTTGTGTTGGTGGACATGGAAATTTCTCTTCATGTAATCCAGTTGTCTCGTGTCTTAATAACACTGGTGCTATTTGGTACTAG 756 0.414 MLVIASRSVCSRITPNTGSTFDVLTYGAIGDGQTDDSNAFLKAFNDACGTTEGTPTMTIPEGKTFLLQPLVFKGDDCIAINNGSSVITITGIFCGPGHGISVGSLGKDNSYATVEDVRVQNCTFTGTSNGGRIKTFEGGSGYARNITYEDIILNEVKNPVIIDQEYKPNADSAVEISGVTYSNIRGTSVGDYAIELKCEHNIGCTDIVLDHINITRADGGEAGVICVGGHGNFSSCNPVVSCLNNTGAIWY 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06161 251 PANTHER - 20 74 - -
Mepo3g06161 251 SUPERFAMILY Pectin lyase-like 72 244 IPR011050 -
Mepo3g06161 251 Pfam Glycosyl hydrolases family 28 69 217 IPR000743 GO:0004650|GO:0005975
Mepo3g06161 251 Gene3D - 73 246 IPR012334 -
Mepo3g06161 251 Gene3D - 6 72 IPR012334 -
Mepo3g06161 251 ProSitePatterns Polygalacturonase active site. 91 104 IPR000743 GO:0004650|GO:0005975
Mepo3g06161 251 SUPERFAMILY Pectin lyase-like 9 74 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06161 Mepo-Chr3 75853828 75856307 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06161 66 245 Glycoside Hydrolase AT4G35670 51.087 5.42e-53 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06161 K01184 - pcin:129286537 225.713