Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06155 ATGAGTACGGTCGACAAGATGCTGATCAAAGGCATCCGGAGTTTCGACCCGGAGAATAAGAACGTCATCACCTTCTTCAAACCCTTAACCCTAATCGTCGGTCCCAACGGTGCCGGCAAAACCACTATCATTGAATGCTTGAAGCTTTCTTGCACCGGTGAGTTACCTCCTAATGCTAGGTCTGGTCACAGCTTCATTCACGACCCCAAGGTTGCAGGAGAGACTGAAACGAAAGGACAGATTAAGCTCCGGTTCAAAACCGCTGCTGGTAGAGATGTGGTTTGCATAAGGTCATTTCAACTCACGCAAAAAGCATCTAAGATGGAATACAAAGCAATTGAGAGTGTGCTTCAAACTATTAATCCTCATTCCGGCGAGAAAGTTTGCCTTAGCTATAGATGTGCTGACATGGATCGAGAGATTCCTGCTCTCATGGGTGTTTCAAAGGCCATTTTGGAAAATGTTATATTCGTTCATCAAGATGAAGCAAATTGGCCACTTCAAGATCCTTCCACGTTAAAGAAGAAGTTTGATGATATCTTTTCCGCAACTCGATACACAAAGGCACTTGAGGTTATAAAGAAACTTCACAAGGATCAAGCTCAAGAGATAAAGACTTACAAGCTGAAACTGGAAAATCTTCAAACCCTGAAAGATGCGGCTTATATGCTTCGGGAAAACATCACACAGGATCAAGAGAAAGCAGAATCTCTAAAAGATCAGATACAGCAGTTGGATGGAAGCATTAAAGATTTGGACGCTAAAATTGATCATGTGGATAAAACATTGAAACATTTGCTGGAGCTAAAGGGGCAAATATCAAGTAAAACTACAGAGCGAAGCACTCTATTTAGGTCACAGCAGAAGCAATATTCCGACCTTGAGGAGGAGTTTGAAGAACCTGATGAGGAGTTGATGGAATCGAAGACCAAGTTTGATGAAAAGATTGCAAATTCACAAACACAAATAAGCAAGTTGGATAGAGAGAAGTCTGACATTAACACAAAATGTCCTGTCCTTAAGAAGACCATCGATCAGTCCATCTGGGAGATCAGCAAGCTACAAACTGAAGCAGAAGCTCACATGTCTCTGAGGAGTGAACGAGATACTTGCATTAAAAATATTTTTGATAGGTATAACTTGGGATCTCTTCCAAAGCCACCCTTCAGTGCTGAGGATGCTTTGAACCTCACTAATCGTGTAAAATCAAGGTTGGTGGATCTTGAGAAGGATCTTGAAGATAAAAAGAACGCAAATAACACTGAACTCAAGATGGCATGGGATTGCTACTTAAATGCAAATGAAAGTTGGCAAAATACTGAAGCTAAAATACAAACTAAGAGAGAGCACAAGGCTGGCATTATAAAGCGCATTGAAGAGAAGAAAAATGAGCTTGAGTCATTCGAACTTGAAATATCTAATATAGATGTTTCTCATTTAGACGAGAGAGAAAGAGAATTGCAAATTCGGCTGGAGGGGAAGATCAAACAACGTGATGAAAGAGAATTTGAACTAAAGAAAAGTGAAATCGAAAATAAAGCCCTTAATGTGGAGCAAAAGATTAGAGCTCTCAATCGAGAGATGCTTACAATGGCTACTGATTCAAAGGAAAGAGAAAAATTATCTCTTATGAAGGGAGATTTGGAGACAAAGAAGAAGCAACATAAAAAGATAATTGATGACCAAAAAGATAAAATAAGAAGGGTGCTAAAAGGGAGGATTCCTTCTGATAAGGACCTGAAGAAGGAAATCACACAAGCATTAAGGACTGTTGTAGCTGAATTTGATGATCTGAATGCTAAGTATCGAGAAGCTGACAAGGAAGTAAATGTTTTGCAGATGAAAGTACAAGAAGCAGACAATAACTTATCTAAACACCAAAAGGATATGTCATCAAGAAAGAAATTTATCGAATCAAAACTTCAGTCTTTGGACCAGCAAGGCTCTGGAATCGATTCTTATCTAAAACTTTTAGAGTCTGCCAAGGAGAAAAGAGATGTACAGAAAAGCAAATATAACATTGCAGATGGTATGCGACAAATGTTTGATCCTTTTGAAAGGGTTGCAAGAGCTCATCATTTTTGCCCTTGCTGTGAGCGTTCTTTCTCGGCAGAAGAAGAAGACAGTTTTGTCAAGAAGCAAAGAGGGAAGGCTGCTAGTTCAGCTGAACATTTGAAAGTTCTTGCTGTGGAGTCCTCAAGTGCAGACTCTGATTATCAGCAGTTGGAGAAGCTTCGTATATGGTATGAAGAATATGTTAAACTAAGCAAGGAGACAATCCCCAGTGCTGAAAAGGAACTCCAGCAAGTCAAGGAAGAGCTGGATCACAAATCCCAGGCACTTGATGATGTTTTAGGTATTTTAGCTCAAGTGAAGACTGACAAGGAGTTGGTTGAGCCGGTGGTGAAATATGTTGAACATGCTGATCGAATTTTCCTCGAAATTCAAACTTTGCAAAAGAAAGTTGAGGATTTAGAAAGTGAGCTTGGTTGTGGAGGACCAGAAGTGAGGACTCTAGAAGAAATTCAATTGGAGCTCGTTGCATTGCAGGGAACAAAGGACAATTTGCATACCGAGTTGACGAATTTGATGGATGAGCAGAGGAATATGGATACTGATATATCAGGTATTCAATCACGGTTGCAGAATGCAAGGGCTGATAAAATGAATGCAGCTATGAAATTGCAAGATGTAAAAAGATTAGAAGAAGAATTAGAACGATTGACAGAAGAAATGACCCAAGTTGATCTTGATGAGAAGAGTCTGACTGAAGCCTTTGGACCTTTATCCAAGCGCAAAGATAAAATACGTGCTGACTATAATGAATTGAAACTTAGACTTGACCACGAGTTTGAGAATCTGGTTGAAAAAAAGAGAATTTATCAGCAAGAAGCTGAAGCAGTTTTTGGAATGACTTCTAAGATCAAAGAGTACTCTAACTCAAAGAAAGGAGACAGGTTGAAGGAGCTGCAGGAAAAGAAATCTCTATTAGAATCTCAACTGCAAAGTTGTGAAACCAGGATGCAGGAAATTATAGATGAACTGGACAAAAGGAAAGATTTGTTGCGAAATACTGATTTGCTTAGAAGAAAAATCGAGGACAACTTAAATTACAGAAAAACAAAGGCTGAAGTAGATGAGCTAGAACGTGAAATTGAAGTACTTGAAGAAAATATGTTGAAGATTGGTGTATCTGACACAATTCAAACCGAACACCAGAAATTATCCCAGGACAGGCAGAGGCTTCTTTCGGAGTCAAACAGGTGCAGAGGAACAATAGATGTTTACCAAAGCAATATTTCCAAAAATAAGATTGATCTTAAGCAGGCCCAATACAAGGACATAGATAAGCGATATTTTGACCAGCTTATCCAGCTTAAGACAACTGAAATGGCAAACAAAGACCTGGACAGATACTACAATGCACTTGACAAAGCACTGATGCGATTCCACACAATGAAAATGGAAGAAATCAACAAAATTATAAGAGAATTGTGGCAACAGACTTATAGAGGACAGGATATTGACTGCATTAGTATTCATTCTGATTCCGAAGGTGGTGGTACCCGATCCTACAGTTACAAGGTTCTCATGCAGACTGGCGATGCTGAGTTAGAAATGAGAGGAAGATGTAGTGCAGGACAGAAGGTACTGGCATCTCTCATCATACGGTTGGCTTTAGCGGAAACATTTTGCCTCAATTGTGGAATTCTTGCATTGGATGAGCCAACCACAAATTTGGATGGCCCAAATGCTGAAAGTCTGGCTGCGGCTATCCTGAGGATCATGGAGGACAGGAAAGGCCAGGAAAATTTTCAGCTAATTGTAATTACTCATGACGAGCGTTTTGCTCAACTGATTGGTCAGCGCCAGCATGCGGAGAGATATTATCGAGTCGCAAAAGATGACCATCAGCACAGTATAATCGAATCTCAGGAGATATTCGACTGA 3951 0.3989 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNARSGHSFIHDPKVAGETETKGQIKLRFKTAAGRDVVCIRSFQLTQKASKMEYKAIESVLQTINPHSGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQTLKDAAYMLRENITQDQEKAESLKDQIQQLDGSIKDLDAKIDHVDKTLKHLLELKGQISSKTTERSTLFRSQQKQYSDLEEEFEEPDEELMESKTKFDEKIANSQTQISKLDREKSDINTKCPVLKKTIDQSIWEISKLQTEAEAHMSLRSERDTCIKNIFDRYNLGSLPKPPFSAEDALNLTNRVKSRLVDLEKDLEDKKNANNTELKMAWDCYLNANESWQNTEAKIQTKREHKAGIIKRIEEKKNELESFELEISNIDVSHLDERERELQIRLEGKIKQRDEREFELKKSEIENKALNVEQKIRALNREMLTMATDSKEREKLSLMKGDLETKKKQHKKIIDDQKDKIRRVLKGRIPSDKDLKKEITQALRTVVAEFDDLNAKYREADKEVNVLQMKVQEADNNLSKHQKDMSSRKKFIESKLQSLDQQGSGIDSYLKLLESAKEKRDVQKSKYNIADGMRQMFDPFERVARAHHFCPCCERSFSAEEEDSFVKKQRGKAASSAEHLKVLAVESSSADSDYQQLEKLRIWYEEYVKLSKETIPSAEKELQQVKEELDHKSQALDDVLGILAQVKTDKELVEPVVKYVEHADRIFLEIQTLQKKVEDLESELGCGGPEVRTLEEIQLELVALQGTKDNLHTELTNLMDEQRNMDTDISGIQSRLQNARADKMNAAMKLQDVKRLEEELERLTEEMTQVDLDEKSLTEAFGPLSKRKDKIRADYNELKLRLDHEFENLVEKKRIYQQEAEAVFGMTSKIKEYSNSKKGDRLKELQEKKSLLESQLQSCETRMQEIIDELDKRKDLLRNTDLLRRKIEDNLNYRKTKAEVDELEREIEVLEENMLKIGVSDTIQTEHQKLSQDRQRLLSESNRCRGTIDVYQSNISKNKIDLKQAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDCISIHSDSEGGGTRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAAILRIMEDRKGQENFQLIVITHDERFAQLIGQRQHAERYYRVAKDDHQHSIIESQEIFD 1316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06155 1316 Pfam AAA domain 7 246 IPR038729 GO:0006302|GO:0016887
Mepo3g06155 1316 Gene3D - 810 981 - -
Mepo3g06155 1316 FunFam DNA repair protein RAD50 3 300 - -
Mepo3g06155 1316 FunFam Os02g0497500 protein 1118 1315 - -
Mepo3g06155 1316 Coils Coil 808 828 - -
Mepo3g06155 1316 Gene3D - 1019 1315 IPR027417 -
Mepo3g06155 1316 Coils Coil 839 866 - -
Mepo3g06155 1316 Coils Coil 398 418 - -
Mepo3g06155 1316 Coils Coil 1031 1065 - -
Mepo3g06155 1316 Coils Coil 588 629 - -
Mepo3g06155 1316 Coils Coil 500 527 - -
Mepo3g06155 1316 Gene3D - 4 305 IPR027417 -
Mepo3g06155 1316 Coils Coil 225 255 - -
Mepo3g06155 1316 Coils Coil 753 780 - -
Mepo3g06155 1316 Coils Coil 881 925 - -
Mepo3g06155 1316 ProSiteProfiles Rad50 zinc-hook domain profile. 648 747 IPR013134 -
Mepo3g06155 1316 MobiDBLite consensus disorder prediction 278 301 - -
Mepo3g06155 1316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 1286 IPR027417 -
Mepo3g06155 1316 Coils Coil 197 217 - -
Mepo3g06155 1316 Coils Coil 451 478 - -
Mepo3g06155 1316 Coils Coil 980 1014 - -
Mepo3g06155 1316 Pfam AAA ATPase domain 933 1283 IPR041685 -
Mepo3g06155 1316 PANTHER RAD50 1 1314 - -
Mepo3g06155 1316 NCBIfam rad50 3 1310 IPR004584 GO:0000723|GO:0005634|GO:0006281|GO:0016887|GO:0030870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06155 K10866 - gmx:100818545 1944.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06155 3 75791790 75806095 Mepo3g06155 3 75791790 75806095 ECH