Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06131 ATGAGTATACCATTTTCTGTGGCAGCAAAGTCTTCCGTCATTAGGACTACCAGAAAACCATGTTATAGAAGATATGATGTTATAACATCAGAATTAATCATGGTTCCAAAACATAAAACAACCACCTTTCCCCAGTTGTCAAAACAAGGAGTTTCTGTTGCTGATTTACATGTACAAGAAGTTGTTGAAAAGCAGTCTCAAACATCCAATTTTGACACTCTATGTTCTAGTAATTTCAAGCCACGGTTTGAGCCTAGTTTTCTCCAGGATGCCTATGAATTGTGCAGAAATATCTGTGCAGAGTATGCCAAGACATTCTATCTAGGAACTTTGCTTATGACAGAAGAAAGACAGAAGGCTATATGGGCTATATATGTTTGGTGCAGGAGGACAGATGAGCTTGTTGATGGTCCTAATGCTGACTACATGAGCTCTGTTGTTCTTGATAGATGGGAAGAAAGATTGCATGACATTTTCAATGGACATCCTTATGACATGCTTGATGCTGCTCTTGCAGATACAATCTCCAAGTTTCCCTTGGATATTAAGCCTTTTAGGGACATGATAGAAGGTATGAGAATGGATACGAGGAAATCACGATACAAAAATTTCGAAGAATTATATCTTTACTGCTACTATGTGGCGGGAACAGTTGGTTTGATGAGTGTTCCAGTAATGGGAATCGCGCCAGAATCCCTTATCCCTGCTCAAAGTGTATATAAATCAGCATTATATCTTGGTATTGGAAATCAACTCACAAATATTCTTAGAGATGTAGGGGAGGATGCATTAAGAGGTAGAGTATACCTTCCACAAGATGAACTTGGTGAGTTTGGTTTATGTGACAAGGATGTTTTCTCAAGAAAGGTGAGTGAACCATGGAGAGAGTTTATGAAACAGCAGATTGCAAGGGCAAGATTCTACTTCAACTCAGCAGAAGAAGGAGCTTCTCACCTTGATAAAGCAAGCCGTTGGCCGGTTTGGTCCTCATTAATATTGTATCGCAAGATCTTAGATGCAATCGAAGACAACGATTATGACAATTTGACAAAACGAGCTTATGTAGGACGAACTGAGAAGTTTGTGTCATTGCCTGCAGCTTATACTAGATCTCTCTCAATTCCCAAAACTGAATCGCATACTTCCTTCACAAGGCATATGTAG 1164 0.3935 MSIPFSVAAKSSVIRTTRKPCYRRYDVITSELIMVPKHKTTTFPQLSKQGVSVADLHVQEVVEKQSQTSNFDTLCSSNFKPRFEPSFLQDAYELCRNICAEYAKTFYLGTLLMTEERQKAIWAIYVWCRRTDELVDGPNADYMSSVVLDRWEERLHDIFNGHPYDMLDAALADTISKFPLDIKPFRDMIEGMRMDTRKSRYKNFEELYLYCYYVAGTVGLMSVPVMGIAPESLIPAQSVYKSALYLGIGNQLTNILRDVGEDALRGRVYLPQDELGEFGLCDKDVFSRKVSEPWREFMKQQIARARFYFNSAEEGASHLDKASRWPVWSSLILYRKILDAIEDNDYDNLTKRAYVGRTEKFVSLPAAYTRSLSIPKTESHTSFTRHM 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06131 387 ProSitePatterns Squalene and phytoene synthases signature 2. 246 271 IPR019845 GO:0016765
Mepo3g06131 387 SFLD Phytoene synthase like 89 370 IPR044843 GO:0004311
Mepo3g06131 387 CDD Trans_IPPS_HH 93 360 IPR033904 GO:0004311
Mepo3g06131 387 FunFam Phytoene synthase chloroplastic 84 366 - -
Mepo3g06131 387 SFLD Isoprenoid Synthase Type I 89 370 - -
Mepo3g06131 387 Pfam Squalene/phytoene synthase 102 357 IPR002060 GO:0009058
Mepo3g06131 387 ProSitePatterns Squalene and phytoene synthases signature 1. 210 225 IPR019845 GO:0016765
Mepo3g06131 387 Gene3D Farnesyl Diphosphate Synthase 85 367 IPR008949 -
Mepo3g06131 387 PANTHER BIFUNCTIONAL LYCOPENE CYCLASE/PHYTOENE SYNTHASE 26 373 - -
Mepo3g06131 387 SUPERFAMILY Terpenoid synthases 90 373 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06131 Mepo-Chr3 75525058 75527538 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06131 K02291 - gmx:100782394 570.081