Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06032 ATGACGTCATCTTCCACCATCCCTCACCTCCCTCCGCCTGAAGACCGCCCCGTTCGTGTCTACGCCGATGGAATCTACGATCTCTTCCATTTCGGCCATGCTCGTTCTCTTGAACAAGCCAAAAAATCATTTCCGAATACGTATCTTCTTGTTGGATGCTGTAGCGATGCGGTGACACATAAGTATAAAGGGAAAACCGTTATGACTGAAGATGAACGTTATGAGTCTCTTCGTCACTGCAAATGGGTGGATGAAGTCATACCTGATGCACCTTGGGTTATTAATCAAGAGTTTCTTGATAAAAATAAGATTGATTTTGTTGCTCATGATTCTCTTCCATATGCTGATACCAGTGGTGCTGCAAATGATGTTTATGAATTTGTTAAGGCAGTTGGAAGATTTAAGGAAACTCAACGGACTGAAGGTATATCTACATCAGATATAATAATGAGGATTGTGAAAGACTATAACCAGTATGTGCTGCGTAACTTGGATCGTGGGTACTCAAGAAAAGACCTTGGTGTGAGCTATGTTAAGGAAAAGCGATTGCGCGTGAATAGGAGACTGAAAACTTTGCAGGAGAAAGTAAGAGAACAGCAAGAAAAGATCCAAACTGTTGCAAAGAATGCTGGTATGCATCGGAATGAGTGGGTGGAAAATGCTGATCGTATGGTTGCTGGGTTTCTAGAAATGTTTGAAGAAGGTTGCCATAAGATGGGGACTGCCATATGTGATCGAATTCAAGAAAGTTTAAGAGGTCAGCAACCAAATGATGAATCAATTTTTCTTCAAAATGGTAAGGATGACGAGGATGAAGAGTATTATGATGATCATGAGGAGGATAGTGATGAAGAATTTTTTGAAGAATATTTTGATGACAATGAGCTTAATCCCCAGAATAATGGGAAAGAGACAAACAAAACATAG 927 0.4035 MTSSSTIPHLPPPEDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCSDAVTHKYKGKTVMTEDERYESLRHCKWVDEVIPDAPWVINQEFLDKNKIDFVAHDSLPYADTSGAANDVYEFVKAVGRFKETQRTEGISTSDIIMRIVKDYNQYVLRNLDRGYSRKDLGVSYVKEKRLRVNRRLKTLQEKVREQQEKIQTVAKNAGMHRNEWVENADRMVAGFLEMFEEGCHKMGTAICDRIQESLRGQQPNDESIFLQNGKDDEDEEYYDDHEEDSDEEFFEEYFDDNELNPQNNGKETNKT 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06032 308 Gene3D HUPs 4 234 IPR014729 -
Mepo3g06032 308 CDD CCT 16 167 IPR041723 -
Mepo3g06032 308 NCBIfam cytidyltransferase-like domain 19 86 IPR004821 GO:0003824|GO:0009058
Mepo3g06032 308 PANTHER CYTIDYLYLTRANSFERASE 12 285 IPR045049 GO:0004105|GO:0006657
Mepo3g06032 308 MobiDBLite consensus disorder prediction 254 284 - -
Mepo3g06032 308 Coils Coil 182 209 - -
Mepo3g06032 308 FunFam Choline-phosphate cytidylyltransferase 2 2 234 - -
Mepo3g06032 308 Pfam Cytidylyltransferase-like 21 150 IPR004821 GO:0003824|GO:0009058
Mepo3g06032 308 MobiDBLite consensus disorder prediction 269 284 - -
Mepo3g06032 308 SUPERFAMILY Nucleotidylyl transferase 19 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06032 Mepo-Chr3 74591044 74594820 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06032 44 292 Acyl Lipid Metabolism Gene Families AT2G32260 74.000 5.91e-134 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06032 K00968 - gmx:100807840 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06032 3 74591044 74594820 Mepo3g06032 3 74591044 74594820 ECH