Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05969 ATGATCAAACAGATACTTGGTAAAATACCGCGAAAGTCGTCAAAATCATCATCACATAGTGATTTTAACGGTGATGGAGGGTTGGTCAATGGTGGCTCTGGTTCATCATTGAATTCATCTTCCAATGACACCTTGAAATCTAATTCAGCTTCTTCAAAATCTTCAAGTTCTGGGAATGGGAGTTCTGCTTCGACGAATTCAAATAAAACAAACCAAACTAAGAAATCAGCTCCTGCAATTGGATCCCAAGTTGGTTTGATAATGGCTAATGGTAATGGAGTTTACGAGGCGTTGCCGAGTTTCCGGGATGTTTCTAGCTCGGAAAAGCCTAATCTTTTTATAAGGAAGTTAAATATGTGTTGTATTGTATTTGATTTTAGTGATCCTAGCAAGCATGTTAAAGAGAAGGATATCAAGAGGCAAACTTTGCTTGAGCTTGTTGATTATATTTCATCTGTGAATTCAAGGTTCAATGAAGCGGCAATGCAAGAGATCACCAAGATGGTGGCGGCAAATTTGTTTAGAACACTACCGTGTTCAAATCATGATGGTAAGGTTGCAGAAGCATATGATCCTGAAGAAGAGGAAACTGCAATGGAACCGGCATGGAATCATCTACAGGTCGTGTATGAAGTTCTCTATAGGTTTGTGGCTTCACCAGAGACAGATGCAAAGCTTGCTAAACGATACATTGATCATTCATTCGTGTTGAGACTGCTTGACCTCTTTGACTCTGAGGACCAGAGAGAGCGGGAATATTTGAAGACTATTCTTCACCGTATTTATGGGAAGTTCATGGTACATCGCCCGTTCATTCGAAAAACTATCAATAACATATTTTATCAGTTCATATTTGAGACAGAAAAACACAACGGAATTGCAGAAATGTTGGAGATTTTGGGCAGTATAATTAATGGATTTGCTTTGCCTTTGAAGGAAGAGCATAAGCTGTTCCTTACCCGTGCATTGATCCCACTTCACAAGCCAAAGTGTGTCTCTATGTATCATCAACAACTTTCTTATTGTGTTACACAGTTTGTCGAGAAAGATGTCAAGTTAGCTGATACTGTGATTAAAGGTCTTTTGAAATATTGGCCTGTAACTAATAGTGCAAAAGAGGTAATGTTCCTCAGTGAACTCGAGGAAGTTCTAGAAGCCACTCAAGCAGCTGAATTTCAGAAATGTGCGGTGGGATTGTTTCGTCAAATTGCTAGATGCCTCACCAGTCTACACTTTCAGGTAGCTGAACGTGCACTGTTTCTGTGGAACAACGATCATATTAGAAATTTGATAATACAAAACTGCAAAGTGATACTACCGATAATCTTCCCTGCTTTGGAGAAAAATGCACGGGGCCACTGGAACCAAGCTGTCCAGAGTTTGACTCTGAATGTGAGAAAAATATTCTCAGATGCTGATCATTCACTTTTTGATGAATGTATGATCAAATTCCAAGAAGATGAAATCAAGGAACGAGAGAAGCAAGAGAGGCGGGAATCCATGTGGAAGAAATTGGAAGATGTGGCTGTTGCATCCACGTCTATAAGCAATGAAGCAGTTCTTGCCTCAAGGTTCGCTTCCTCTCTTGCCGTTGCTGCAGTTCAATGA 1608 0.4005 MIKQILGKIPRKSSKSSSHSDFNGDGGLVNGGSGSSLNSSSNDTLKSNSASSKSSSSGNGSSASTNSNKTNQTKKSAPAIGSQVGLIMANGNGVYEALPSFRDVSSSEKPNLFIRKLNMCCIVFDFSDPSKHVKEKDIKRQTLLELVDYISSVNSRFNEAAMQEITKMVAANLFRTLPCSNHDGKVAEAYDPEEEETAMEPAWNHLQVVYEVLYRFVASPETDAKLAKRYIDHSFVLRLLDLFDSEDQREREYLKTILHRIYGKFMVHRPFIRKTINNIFYQFIFETEKHNGIAEMLEILGSIINGFALPLKEEHKLFLTRALIPLHKPKCVSMYHQQLSYCVTQFVEKDVKLADTVIKGLLKYWPVTNSAKEVMFLSELEEVLEATQAAEFQKCAVGLFRQIARCLTSLHFQVAERALFLWNNDHIRNLIIQNCKVILPIIFPALEKNARGHWNQAVQSLTLNVRKIFSDADHSLFDECMIKFQEDEIKEREKQERRESMWKKLEDVAVASTSISNEAVLASRFASSLAVAAVQ 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05969 535 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 512 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mepo3g05969 535 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 98 509 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mepo3g05969 535 SUPERFAMILY ARM repeat 110 491 IPR016024 -
Mepo3g05969 535 PIRSF PP2A_B56 2 533 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mepo3g05969 535 MobiDBLite consensus disorder prediction 10 78 - -
Mepo3g05969 535 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 105 508 - -
Mepo3g05969 535 Gene3D - 106 508 IPR011989 -
Mepo3g05969 535 MobiDBLite consensus disorder prediction 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05969 Mepo-Chr3 73936148 73943732 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05969 K11584 - rcu:8282540 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05969 3 73936148 73943732 Mepo3g05969 3 73936148 73943732 ECH
Mepo4g00676 4 9076819 9080065 Mepo3g05969 3 73936148 73943732 PCT