Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo3g05860 | ATGGCAACAAATAACCCAGCCATGAAGAAATCGAGGGGCTCCGATTCTCCAGCCATGAAAAAATCATGGTCAAGAGGCTCCGACTCAACTCAATTCGAATCACCCGCGCGTTTCTGCTCTCCCTTACGATGGGACCCAGCAGACTCACCGGAGTATCGCTCACCGGAAAACTCGCCGGGAAAAATGATGGAAAATTCAAATCCAATGGCAGTAGTCGCAGTTGATAAAGTCCGGCAGTTAACTCCTGGAAAATTAACGGAGCAACAGAAGCCACCGGAGAATGCTTTGGCGGTGGTCAACCGATCAGAGAGAGAGGAGCCGCAACGGCAGGTGACGAAGGTGGGGACCACAGAGGAAGGTGGTGAGCGCGAGCGGAGAGTTAGGTCGGATTCAGTTGGGAAGACGGCGGAGGAGGTGACGAGAAAGGCGGCTTTAGGGTTCCGGCTGTGTGAGGTGGTGGTGTGTTTGATTTCGTTTTCGGTTATGGCTGCGAATAAGACGCAAGGTTGGAGTGGAGACTCTTATGATCGTTACAAAGAATACAGGTATTGTTTATCTGTGAATGTTATCGGATTTGCATACGCAGCATTACAAGCATGTGATCTGGCCTTTCAACTAGTCACAGAGAAACACATGATCAGTCACCACCTTCGCTATCACTTTCAGTTCTTTATGGATCAGGCTGTGGCATATCTTCTGATATCAGCATCATCCTCTGCCGCTACAAGGGTGGATGATTGGCAATCAAATTGGGGGAAAGATGACTTCACAGAGATGGCCACTGTTTCTGTTGGAATGTCATTCCTATCTTTTGGTGCTTTTGCTATGAGCTCACTCATCTCTGGTTACATCCTTTGTACCCGCCGCAACTCCATGTGA | 879 | 0.4903 | MATNNPAMKKSRGSDSPAMKKSWSRGSDSTQFESPARFCSPLRWDPADSPEYRSPENSPGKMMENSNPMAVVAVDKVRQLTPGKLTEQQKPPENALAVVNRSEREEPQRQVTKVGTTEEGGERERRVRSDSVGKTAEEVTRKAALGFRLCEVVVCLISFSVMAANKTQGWSGDSYDRYKEYRYCLSVNVIGFAYAALQACDLAFQLVTEKHMISHHLRYHFQFFMDQAVAYLLISASSSAATRVDDWQSNWGKDDFTEMATVSVGMSFLSFGAFAMSSLISGYILCTRRNSM | 292 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo3g05860 | 292 | Pfam | Casparian strip membrane protein domain | 140 | 272 | IPR006702 | - | |
| Mepo3g05860 | 292 | PANTHER | CASP-LIKE PROTEIN 4A4 | 117 | 286 | - | - | |
| Mepo3g05860 | 292 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
| Mepo3g05860 | 292 | MobiDBLite | consensus disorder prediction | 1 | 70 | - | - | |
| Mepo3g05860 | 292 | MobiDBLite | consensus disorder prediction | 82 | 134 | - | - | |
| Mepo3g05860 | 292 | MobiDBLite | consensus disorder prediction | 99 | 134 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo3g05860 | Mepo-Chr3 | 72941127 | 72943203 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo3g05860 | - | - | gmx:100789870 | 328.176 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mepo1g01383 | 1 | 13656409 | 13658178 | Mepo3g05860 | 3 | 72941127 | 72943203 | ECH | |
| Mepo3g05860 | 3 | 72941127 | 72943203 | Mepo3g05860 | 3 | 72941127 | 72943203 | ECH | |
| Mepo1g01383 | 1 | 13656409 | 13658178 | Mepo3g05860 | 3 | 72941127 | 72943203 | PCT |