Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05852 ATGGTTGGTGCCGGGGACCCACACTCTGTTGTTTTCCATCTTCCAGGAAAGAGTACTCATATCCATCCAAGCAAGTTTATTGATAACGGCAGTACAGGGGAAACCAATTACAACTTAGATGTGTGCATATCTGAAGAACTTCTAGTTGTCCTTATGAAATTACTAATGAAGTATCTGATGGATGATTCAGTGAAAATTGTGGATATGGCTTCACAAACTCTTCGTGGAATTCTTTCGACTGAAAGAGGCCAGAAAGCTTTACAGTCATTTGATTCTTACCAAAGGTCACTCGTCAAGATACATTCCAAAGGCGTTAATATCGAACTTGTGGAAAATTTCCTTTTGGATCTTGATAGGAAGTCAAAAGTTGCAGAAATTTCACTGGAGAAGTCTACCGTGTGGTTGACAGATGGTAAATCTTTTGAGACGTGGATTTGCCCTTTGGTGTATTCTCTTATTGTCTACTGCAACGATGTAGTACTAAGATTATGTCAAGATATGATATTGTTGAAAGCCGAATTTGCTGAGCTTCTTTTGCCAAGTATATTTGTCAATATTGCTGCAAGGAAGGATCTGGAGATTGATCTTCACAAATTAATTTCTTTGCAGTTGAAGGAGCATATATTTGTAGAGTCAAATAAGATGATCAAATCAATTCAAGTGATTTTGAATTGCCTTAATGAACTTCGAGTTTGTTATGTCATGGAAAGATCATCACTTGTGCCATCAATGCATGAAGTGTCCAAGAATTCAAGAACTCCAAATTATAGCTCAAAATCTCGGTCCACTCCTGCAAAAGCGAGACAGAGACAATCTGCTGTTATTTCAAGTGGCTTGTCAGAATCACCGTCTTCATGGGAGAAAGTTTATTGGCTTTCAATTGATTATCTACCTGTTGCCAAGGCAGCAGTTAGTTGTGGATCATATTTTACTTCAGTGATGTATGTGGAACACTGGTGTGAAGAGCAATTCAAAACTATGACTGTTGGAGGTCCAGATTTCTCTCATAACGAAACGTTGCCTGATCATATTGAAGTACTCGTTTCGGCAGTCACTAGAATCAATGAACCTGATAGCTTATACGGAATCCTTCAGTCTCACAAGTTGACTTCCCAAGTAATCACGTTCGAGCATGAGGGAAACTGGGGAAAGGCTCTTGAGTATTATGATTTGCAAGTTCAATCAGGTGTCTTATTACCAAAGGATAGCAGTTCGAGAAGTTTGTCACTGGAACATGCTGAACCAGCAAAATCTTCATATATTGCCTCAGAGGTTGAGATGAGGCAGAGTAGAGCTTACAAAGGGTTGATTAGATCATTGCAGCAGATCGGCTGCACGCATGTGCTTGACATGTATTGTCAAGGGTTGACATCAAGCAAGGAAGATTTTCGGCATGACAGAGAATTTGCTGAATTGCAATATGAGGCAGCCTGGCGTGCTGGGAACTGGGATTTCTCTTTACCGTGTGTAGGAACTAGTTTTCCTCCAACTCAAAACATCAAATATGATCAGTTTAATGAAAATTTGCACAGTTGTTTAAGGGCACTCCAGGAAGGTGATTTAATTGATTTCCAGAGAAAGCTGAGAGATTCAAAGCAGGAGCTTGTGTGGTCCGTTTCTCATGCAAGTGAAGAGAGTACCGAGTACATTTATTTGACAATCATCAGACTCCAGATGCTTTATCATCTTGGCATGGCTTGGGATTTACGCTGGAGAACTTGCCAAGATGATATCAGAAAGTTCTCTCTTCAGAAGCGAAATGTGTCTCTTGAGCCCATGATTCCTTCCAGTGAACAGTTGTCATGGTTGGATATGGATTGGTGCTCAATTTTGCAACGGACGCAACTGAACATGAATTTGCTAGAACCATTTATACCATTTCGACAAGTTCTACTTCAAACTCTGAGTTGTAAAGATAGTATGTTGCAACATCTTCTGCAGTCTGCTACGACACTTCGGAAGGGATCTAGGTTTTCTCAAGCAGCTGGTGTTTTGCATGAATTTAAGTCCCTTTGTGTTGGAACCAAAGGGCAGTGCTCATCTTTATATTGGCTTGGAAGGATTGAAGAAGCAAAGCTTTTTCGTGCTCAAGGTCAAAATGAGATGGCTATCAACCTTGGAATGTACATATCACAAAATTATCAAAGTAATGAAGAGGTTTCAGATGTAAATCGCTTGATTGGGAAGTGGCTGGCAGAGACCAGATCTAGCAACTCAAGAACAATTTTGGAGAAGTATTTGAAACCTGCAGTCTCTATTGCTGAGGATGTGAAAAGTACAGATAAGAAGGCCATGGAAAAGAAATGTCAAACTCATTTTCATCTTGCACACTATACTGATGCTCTATTTAGGAGCCATGAAGAAAGACTTAATTCTAATGAGTGGCAATCAGCAATGCGGTTAAGAAAGCATAAGACAGTAGAGTTGGAAGCACTCATTAAAAGGTTCAGGAGTTCAACAAAGGGGGAGAAAACTGACTACACTATGAAAATCCAAGAATTACAGAAGCAAGTAGCTATGGATAAGGAAGAAGACCAGAAATTACAGGATGACCGAGACAATTTTCTTAATCTGGCATTGGAGGGATACAAACGTTGTTTAGTCATAGGTGACAAGTATGATGTGCGAGTGGTGTTTCGAATTGTTTCCTTGTGGTTCAGCCTTTCTTCTCGAAAACATGTTGTAAATAGCATGCTTAGCACAATTGACGAGGTTCAATCCTTCAAATTTATACCGTTAGTATACCAAATTGCTTCCAGAATGGGTAGCTCAAAGGATGGTCAGGGACCTCTTAATTTCCAGTTTGCTTTGGTTTCTCTTGTGAAGAAAATGGCTATTGATCATCCATACCATACAATTCTTCAACTTCTGGCCCTGGCAAATGGTGACCGTATCAAGGATAAACAGCGTAGTAGAAGTTCATTTGTCGTGGATATGGACAAAAAACTTGCAGCAGAAAACCTTCTAAATGAGTTGTCATCTTATCATGGAGCTATCATACGACAAATGAAGCAAATGGTGGATATTTATATCAAACTTGCTGAGATGGAAACAAAGAAAGAGGATACTAATAAAAGAATGACACTACCAAGGGATTTACGTAATCTCCCAGTGCTAGAACTTGTACCTGTAGTGACAGCTACCATTTCAATTGATCGTAGTTGTCAATATCATGATGGCACGTTTCCTTACTTCAAAGGATTAGCAGATTCTGTTATGATAATGAATGGTATAAATGCTCCTAAAGTGGTTGAGTGCTTGGGTTCTGATGGCTGCAGATATCGGCAACTTGCAAAATCTGGAAATGATGACCTAAGACAGGATGCTGTAATGGAACAATTCTTTGGTTTAGTTAACACATTCCTGAGGAACCATCAAGATACATGGAGAAGAAGGCTTGGTGTACGGACCTACAAGGTTGTTCCTTTTACTCCAAGTGCTGGTGTTCTTGAATGGGTTAACGGCACTCTTCCTCTCGGTGAATATCTTTTAGGAAGCTCGAGAGATGGTGGTGCTCATGGTCGCTATGGAGTAGGGGACTGGTTATTCTCTAAATGTCGAATGCACATGTCAAATGAAAGGGACAAGCGCAAAGCATTTCAGGAAGTTTGCAGGAATTTCAGGCCTGTCATGCATTTCTTTTTCTTGGAGAGGTTTCTACACCCAGCTGAGTGGTTTGACAAGAGACTTGCGTATACCCGAAGTGTTGCTGCTAGTTCTATGGTTGGTTATATTGTTGGCCTTGGAGATCGACATTCAATGAATATTTTAATTGATCAGACCACTGCAGAGGTTGTTCACATTGATCTTGGTGTTGCTTTTGAACAAGGCTTGATGCTTAAGACCCCAGAACGGGTTCCATTTAGGCTCACAAGAGACGTAATTGATGGAATGGGTGTAACTGGTGTAGAGGGGGTTTTCCGAAGATGTTGCGAGAAAACTCTCTCTGTGATGCGGACAAACAAAGAGGCATTACTGACAATTGTGGAAGTGTTCATCCATGATCCTCTTTATAAGTGGGCTTTATCTCCTCTGAAAGCTTTGCAGCGTCAAAAGGAAATGGAAGTTGATTTCGATACAGGTTTGGAGGAACCTCAAAACGAGTATGAAGGAAATAAGGATGCTGCACGTGCACTTTTACGTGTAAAGCAAAAGCTGGATGGGTATGAAGATGGTGAAATGCGAAGTATCCATGGACAGGTACAACAACTCATCCAAGATGCAATCGATTCTGATCGATTGTGCCAAATGTTTCCTGGTTGGGGAGCTTGGTTATGA 4278 0.4053 MVGAGDPHSVVFHLPGKSTHIHPSKFIDNGSTGETNYNLDVCISEELLVVLMKLLMKYLMDDSVKIVDMASQTLRGILSTERGQKALQSFDSYQRSLVKIHSKGVNIELVENFLLDLDRKSKVAEISLEKSTVWLTDGKSFETWICPLVYSLIVYCNDVVLRLCQDMILLKAEFAELLLPSIFVNIAARKDLEIDLHKLISLQLKEHIFVESNKMIKSIQVILNCLNELRVCYVMERSSLVPSMHEVSKNSRTPNYSSKSRSTPAKARQRQSAVISSGLSESPSSWEKVYWLSIDYLPVAKAAVSCGSYFTSVMYVEHWCEEQFKTMTVGGPDFSHNETLPDHIEVLVSAVTRINEPDSLYGILQSHKLTSQVITFEHEGNWGKALEYYDLQVQSGVLLPKDSSSRSLSLEHAEPAKSSYIASEVEMRQSRAYKGLIRSLQQIGCTHVLDMYCQGLTSSKEDFRHDREFAELQYEAAWRAGNWDFSLPCVGTSFPPTQNIKYDQFNENLHSCLRALQEGDLIDFQRKLRDSKQELVWSVSHASEESTEYIYLTIIRLQMLYHLGMAWDLRWRTCQDDIRKFSLQKRNVSLEPMIPSSEQLSWLDMDWCSILQRTQLNMNLLEPFIPFRQVLLQTLSCKDSMLQHLLQSATTLRKGSRFSQAAGVLHEFKSLCVGTKGQCSSLYWLGRIEEAKLFRAQGQNEMAINLGMYISQNYQSNEEVSDVNRLIGKWLAETRSSNSRTILEKYLKPAVSIAEDVKSTDKKAMEKKCQTHFHLAHYTDALFRSHEERLNSNEWQSAMRLRKHKTVELEALIKRFRSSTKGEKTDYTMKIQELQKQVAMDKEEDQKLQDDRDNFLNLALEGYKRCLVIGDKYDVRVVFRIVSLWFSLSSRKHVVNSMLSTIDEVQSFKFIPLVYQIASRMGSSKDGQGPLNFQFALVSLVKKMAIDHPYHTILQLLALANGDRIKDKQRSRSSFVVDMDKKLAAENLLNELSSYHGAIIRQMKQMVDIYIKLAEMETKKEDTNKRMTLPRDLRNLPVLELVPVVTATISIDRSCQYHDGTFPYFKGLADSVMIMNGINAPKVVECLGSDGCRYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNHQDTWRRRLGVRTYKVVPFTPSAGVLEWVNGTLPLGEYLLGSSRDGGAHGRYGVGDWLFSKCRMHMSNERDKRKAFQEVCRNFRPVMHFFFLERFLHPAEWFDKRLAYTRSVAASSMVGYIVGLGDRHSMNILIDQTTAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDVIDGMGVTGVEGVFRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQRQKEMEVDFDTGLEEPQNEYEGNKDAARALLRVKQKLDGYEDGEMRSIHGQVQQLIQDAIDSDRLCQMFPGWGAWL 1425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05852 1425 ProSiteProfiles FATC domain profile. 1393 1425 IPR003152 GO:0005515
Mepo3g05852 1425 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 1235 1255 IPR018936 GO:0016301
Mepo3g05852 1425 Gene3D - 992 1153 - -
Mepo3g05852 1425 ProSiteProfiles FAT domain profile. 298 962 IPR014009 -
Mepo3g05852 1425 Coils Coil 824 851 - -
Mepo3g05852 1425 FunFam Serine/threonine-protein kinase ATM 994 1153 - -
Mepo3g05852 1425 Pfam Phosphatidylinositol 3- and 4-kinase 1101 1341 IPR000403 -
Mepo3g05852 1425 PANTHER SERINE/THREONINE-PROTEIN KINASE ATM 2 1425 IPR038980 GO:0004674|GO:0006974
Mepo3g05852 1425 MobiDBLite consensus disorder prediction 245 276 - -
Mepo3g05852 1425 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 1098 1113 IPR018936 GO:0016301
Mepo3g05852 1425 SUPERFAMILY Protein kinase-like (PK-like) 1001 1354 IPR011009 -
Mepo3g05852 1425 FunFam Serine/threonine-protein kinase ATM 1199 1389 - -
Mepo3g05852 1425 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 1068 1380 IPR000403 -
Mepo3g05852 1425 SMART FATC_2 1393 1425 IPR003152 GO:0005515
Mepo3g05852 1425 Gene3D - 1199 1389 IPR036940 -
Mepo3g05852 1425 SMART pi3k_hr1_6 1095 1389 IPR000403 -
Mepo3g05852 1425 CDD PIKKc_ATM 1065 1342 IPR044107 GO:0004674|GO:0006281|GO:0006974
Mepo3g05852 1425 Pfam FATC domain 1396 1425 IPR003152 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05852 Mepo-Chr3 72838129 72863930 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05852 1214 1351 Lipid Metabolism Gene Families AT5G09350 26.000 6.60e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05852 K04728 - gmx:100788458 2437.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05852 3 72838129 72863930 Mepo3g05852 3 72838129 72863930 ECH