Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05848 ATGCTGAGAATCGCAAAGAAACTCGTGCAAACGGCGTCGTTTGAGTCGCCAATTCCAGTAATTATTGTTCGTCCACGATTTTACGACGAGAGGGTGGTGGATCACTACAACAATCCCCGGAATGTTGGATCCTTCAATAAGAAGAATGAGAATAGGACGATTGTTGATTCTTGCTTTAAGACTTTTGGTTGTGGTTCCGCCATTGCTTCATCTTCTGTTGCTACTGAATGGGTAAAGGGAAAGCAGTTGGAGGAGGTTTTAACCATTAAGAACACTGAGATTGCAAAGCATCTTAATCTCCCACCAGTTAAGCTTCACTGCAGCATGCTTGCTGAGGATGCTATAAAAGCAGCTGTTAAAGATTATGAAGCTAAGCATGCCTCGGCTACTGCGGCCATGGGAGACAAATCTGCCACTGCATGA 423 0.4444 MLRIAKKLVQTASFESPIPVIIVRPRFYDERVVDHYNNPRNVGSFNKKNENRTIVDSCFKTFGCGSAIASSSVATEWVKGKQLEEVLTIKNTEIAKHLNLPPVKLHCSMLAEDAIKAAVKDYEAKHASATAAMGDKSATA 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05848 140 Pfam NifU-like N terminal domain 50 127 IPR002871 GO:0005506|GO:0016226|GO:0051536
Mepo3g05848 140 Gene3D - 42 128 - -
Mepo3g05848 140 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 21 50 IPR002871 GO:0005506|GO:0016226|GO:0051536
Mepo3g05848 140 CDD IscU_like 28 118 IPR002871 GO:0005506|GO:0016226|GO:0051536
Mepo3g05848 140 SUPERFAMILY SufE/NifU 27 126 - -
Mepo3g05848 140 FunFam Iron-sulfur cluster assembly enzyme ISCU, mitochondrial 45 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05848 Mepo-Chr3 72767657 72770149 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05848 K22068 - gmx:100806169 192.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05848 3 72767657 72770149 Mepo3g05848 3 72767657 72770149 ECH