Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g05820 ATGGCACCACCAAGCATAACCAAAACAGCTGCACCCATAGATGTAATAGGCCTCGTCGATATAACTAACCCACCCTTATCCATCACCTTAAACGACTCATGTTTTCTTGCAAATGGCCACCCTTTTCTCACTCAAGTCCCACCCAACATAACAACCACCACCCCTTCCCCTTTTCTCCATAATTCCAAATCCAACTACAATACCACGTTGCAACATGGTTGCTTCGTTGGTTTCAACACCACCGAACCCAAAAGCCACCACGTGGTTCCACTTGGCAAACTAAAAGGAATCCGGTTCATGAGTATATTCCGGTTTAAGGTTTGGTGGACAACTCACTGGACCGGAACCAACGGACATGAGTTAGAACATGAAACACAAATGTTAATCCTTGACCAAAACAAATCCCTTGGACGCCCCTATGTTTTACTTCTCCCAATCATCGAAAACTCCTTCCGAACCTCTCTCCAACCAGGTGTCCATGATTACGTGGACATCTGTGTGGAGAGTGGTTCAACACATGTCCTTGACTCCCATTTCAAATCATGTCTTTACATCCACGTCAGCAACGACCCCTACCGTTTAGTAAAAGAAGCAATGAAAGTAATCCAGGCCCACTTAGGAACATTCAAATTACTTCAAGAAAAAACACCACCGAATATTATTGACAAATTCGGTTGGTGCACGTGGGATGCATTTTATTTGAAAGTGCATCCCAAAGGCGTGCAGAAAGGTGTTAAGGGTCTTACTGAGGGTGGATGTCCACCGGGTCTAGTCTTAATAGATGATGGATGGCAATCCATTTGTCATGATGATGATCCAATAACGGACCAAGAAGGTATGAACCGAACCTTAGCTGGGGAACAAATGCCATGTAGGCTAATAAAATATGAAGAAAATTATAAATTTAGAGAATATAAAAGTCCTAAAAATGAATGTAACAAAGGTATGGGTGGTTTTATTAGGGACTTGAAGGAAGAGTTTAAGAGTGTTGAGAATGTTTATGTTTGGCATGCACTTTGTGGGTATTGGGGTGGGGTTAGACCTAAAGTGAAGGGCATGCCCGAAGCTAAGGTTGTTACTCCGAAGCTATCTCCGGGGCTGAAGATGACAATGGAGGATTTAGCGGTGGATAAGATTGTTAATAATGGTGTGGGATTAGTGCCGCCAAATTTAGCCCAAGAAATGTTTGAAGAGCTTCACTCTCATTTGGAATCGGTGGGCATTGACGGTGTTAAGGTTGACGTTATTCATTTGCTTGAGATGCTATCAGAGGAATATGGTGGACGTGTTGAGCTTGCTAAAGCCTATTACAAAGCACTAACCTCATCAGTGAAGAAACATTTCAAAGGCAATGGAGTGATTGCAAGCATGGAGCATTGCAACGACTTCTTTCTCCTCGGCACAGAAGCAATATCCCTCGGACGTGTAGGAGATGATTTTTGGTGTTCTGATCCATCTGGTGATCCAAATGGTACATATTGGCTTCAAGGTTGTCACATGGTACATTGTGCCTATAACAGTTTATGGATGGGAAATTTCATTCACCCGGATTGGGACATGTTTCAATCCACTCATCCTTGTGCTGAATTTCATGCTGCCTCTAGAGCCATCTCCGGTGGACCAATTTATGTTAGTGATTGTGTTGGTAATCACAATTTCAAGTTGCTTAAAACTCTTGTTTTACCTGATGGTTCTATCTTGCGTTGTCAACATTATGCACTCCCTACACGAGATTGCTTGTTTGAAGACCCTTTACATGATGGCCAAACAATGCTCAAAATTTGGAATCTCAACAAATACACGGGTGTTTTGGGCCTATTCAATTGCCAAGGTGGTGGGTGGTGTCCTGAGACACGGCGAAACAAGAGTGCGTCTGAATTTTCACACTTGGTTACATGTTATGCAAGTCCGGAAGATATCGAATGGTGCAACGGTAAAAGCCCAATGTGCATCAAAGGTGTAGATGTGTTTGCTGTGTATTTCTTCAAGGAGAAGAAACTGAAGCTCATGAAGTGTTCTGATAAATTGGAAGTTTCACTCGAGCCGTTTAGTTTTGAGCTAATGACAGTGTCTCAAGTGAGAGTGTTTTTAAAAGGGTTGATTCAGTTTGCTCCAATTGGGTTAGTGAACATGCTTAACTCTGGTGGTGCTGTTCAGTCTCTGGAGTTTGATGATCATGCTAGTTTGGTTAAAATTGAGGTGAGGGGTTGTGGGGAAATGAGTGTGTTTGCGTCTGAGAAACCAGTTTGTTGCAAAATAGATGGGGTGGCTGTGAAATTTGATTATGTTGACAAAATGGTGAGAGTCCAAATTCCTTGGCCTAGTTCTTCAACTTTGTCTTTGGTCGAGTTTTTATTTTGA 2361 0.4248 MAPPSITKTAAPIDVIGLVDITNPPLSITLNDSCFLANGHPFLTQVPPNITTTTPSPFLHNSKSNYNTTLQHGCFVGFNTTEPKSHHVVPLGKLKGIRFMSIFRFKVWWTTHWTGTNGHELEHETQMLILDQNKSLGRPYVLLLPIIENSFRTSLQPGVHDYVDICVESGSTHVLDSHFKSCLYIHVSNDPYRLVKEAMKVIQAHLGTFKLLQEKTPPNIIDKFGWCTWDAFYLKVHPKGVQKGVKGLTEGGCPPGLVLIDDGWQSICHDDDPITDQEGMNRTLAGEQMPCRLIKYEENYKFREYKSPKNECNKGMGGFIRDLKEEFKSVENVYVWHALCGYWGGVRPKVKGMPEAKVVTPKLSPGLKMTMEDLAVDKIVNNGVGLVPPNLAQEMFEELHSHLESVGIDGVKVDVIHLLEMLSEEYGGRVELAKAYYKALTSSVKKHFKGNGVIASMEHCNDFFLLGTEAISLGRVGDDFWCSDPSGDPNGTYWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDCVGNHNFKLLKTLVLPDGSILRCQHYALPTRDCLFEDPLHDGQTMLKIWNLNKYTGVLGLFNCQGGGWCPETRRNKSASEFSHLVTCYASPEDIEWCNGKSPMCIKGVDVFAVYFFKEKKLKLMKCSDKLEVSLEPFSFELMTVSQVRVFLKGLIQFAPIGLVNMLNSGGAVQSLEFDDHASLVKIEVRGCGEMSVFASEKPVCCKIDGVAVKFDYVDKMVRVQIPWPSSSTLSLVEFLF 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g05820 786 Pfam Raffinose synthase or seed imbibition protein Sip1 31 767 IPR008811 -
Mepo3g05820 786 Gene3D Aldolase class I 216 560 IPR013785 -
Mepo3g05820 786 SUPERFAMILY (Trans)glycosidases 220 569 IPR017853 -
Mepo3g05820 786 PANTHER - 30 784 IPR008811 -
Mepo3g05820 786 FunFam Probable galactinol--sucrose galactosyltransferase 5 222 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g05820 Mepo-Chr3 72465548 72470061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g05820 1 786 Glycoside Hydrolase AT5G40390 63.980 0.0 1063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g05820 K06617 - gmx:100800308 1300.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g05820 3 72465548 72470061 Mepo3g05820 3 72465548 72470061 ECH